Gene Shew_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2873 
Symbol 
ID4921845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3413555 
End bp3414028 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID640164470 
Productbacterioferritin 
Protein accessionYP_001094998 
Protein GI127513801 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2193] Bacterioferritin (cytochrome b1) 
TIGRFAM ID[TIGR00754] bacterioferritin 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTC ATCCGAACGT CATTCGTCAG TTAAACAAGA TACTGACCTT CGAATTGACG 
GCCATCAACC AATACTTCTT GCACGCACGC ATGTACAAAA ATTGGGGTCT GGAAGAGCTC
AATGAGAAGT GCTACAAGAA GTCGATCAAA GATATGAAGC ATGCCGACAA GCTGATCGAG
CGGGTGCTGT TTCTCGAAGG CCTGCCTAAT CTGCAACAGC TCGAGAAGCT GCGCATAGGT
GAGAACCCGG AAGAGATGTT GCAGTGCGAC AAGACCATGC TCGAAGAGCA GCTGGTCGAG
CTGCGCAGCG TGATCGCCCT GTGTGAGACG GAGCGAGACT ATGTGAGCCG CGAGATCCTC
GAAGACCTGC TCGAAGATGA GGAGGAGTAT CTGGACTGGA TCGAGGCGCA GCAAGATCTG
ATTAAGATGA CGGGCATTCA AAATTACCTG CAGTCGCAGA TGGAATCTGA ATAG
 
Protein sequence
MKGHPNVIRQ LNKILTFELT AINQYFLHAR MYKNWGLEEL NEKCYKKSIK DMKHADKLIE 
RVLFLEGLPN LQQLEKLRIG ENPEEMLQCD KTMLEEQLVE LRSVIALCET ERDYVSREIL
EDLLEDEEEY LDWIEAQQDL IKMTGIQNYL QSQMESE