| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2865 |
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| Symbol | |
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| ID | 4922244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3397601 |
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| End bp | 3398365 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164462 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001094990 |
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| Protein GI | 127513793 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAG GTAAGGCTGA GGGGAAGGTA GAGGGCATGG CAGAAGGTAA GGCTGAGGGG
AAGGTTAAAG GTAAGGCTGA GGTTAAGGCT GAGGTTAAGG CTGAGGTTAA GGCTGGGGGT
AAGAGAGCCG AGATGAGCCT CAGGGAGCGC AAGAAGCTGC AGATGCGTCA AACCCTACTG
GCTATCGCCG AGGAGCTCTT TTCGACTTTG CCCTTCGAGG AGGTGATGGT CGATGAGATC
GCGGCGCGGG CCAACATTAG CCAGAAAACC TTTTTCAACT ACTTTCCCAC TAAGGCGCAG
TTGCTGGAGG AGCTACTGCT GAGCTGGTTG CGCCAGGTTA ACCTCTGGCC GTCACCCACG
GAGAATGTGA CCGATGTGCG TTCGGCGCTG GTGCCGCCAA ACCTCAATGA GATTCAGCTG
TGGGTGATCG CCCACAGGCA TATTCTGCAG ATGATCATGC GCCACACGGA TCTCTTCGCC
TCCGTCTATT ACTCCTCCCA GGTGCCTGCA GGCAAGAATC TGTTATTCCC GCCCGAATAT
CGCCAGCCGA GGATGGACAG GGTCAAGCGG GCGCAGGAGC AGGGGGTCAT ACGCGGCGAT
ATCGCCCCAG AGCTCGTCTG TGAGATGTAT GACCTGCTGC GTATCGACAT AGTGCAGCGT
TGGCTCTGTA TGCCTGAGGA GCAGGCCTGT GGCGAGCTGT ATCAACGCAC CTATGATGAG
ATGGTGGCCA TCTTCTTCCG TGGCCTGCAG CCCGACAGCA ACTAG
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| Protein sequence | MAEGKAEGKV EGMAEGKAEG KVKGKAEVKA EVKAEVKAGG KRAEMSLRER KKLQMRQTLL
AIAEELFSTL PFEEVMVDEI AARANISQKT FFNYFPTKAQ LLEELLLSWL RQVNLWPSPT
ENVTDVRSAL VPPNLNEIQL WVIAHRHILQ MIMRHTDLFA SVYYSSQVPA GKNLLFPPEY
RQPRMDRVKR AQEQGVIRGD IAPELVCEMY DLLRIDIVQR WLCMPEEQAC GELYQRTYDE
MVAIFFRGLQ PDSN
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