| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2864 |
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| Symbol | |
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| ID | 4922243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3395303 |
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| End bp | 3397429 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640164461 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001094989 |
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| Protein GI | 127513792 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG CCACCCTGTA CCAAATTCAT GGACGCACCG CCGTCATCAT ACTCAACCAG
CCTCCTGTTA ACAGCCTGGG GCTGGCGCTG CGCACCCACC TGCTGGCCGA TCTCAAGAGA
GCCGAAGCCG ATGAGTCGGT GGACGCCATA GTGCTCGCCT CCTCGGGCAA GCTGTTTTGC
GGCGGCGCCG ACATCAGCGA GTTTTCTTCC GACGACGCCC TCGCCGAGCC CAACCTGCCT
CAGGTATGCG ATGCCCTCGA GGCCTCTCCT AAGCTGGTTG TTGCCGCCGT GAACGGCCTA
GCGCTGGGCG GCGGTTGTGA GCTGACGCTG GCCTGCGACT ATCGCATCGC CCTGCCTGCG
GCCAAGCTGG GACTGCCCGA AGTTAATCTC GGTATCCTGC CCGGCGCCGG CGGCACCCAG
CGTCTACCCC GCATCGGCGG CGTTCAGCTG GCCCTTGAGA TGATCACCAG TGGTCGTCCC
CTCGGCGCGG CGGCTATGCT GGATGCTGGC GTGATCGATA ATTTGTATCA AGACGGCGGC
AACTTCATTC AGGCCGCAGT CGACTTTGCC CAAGAGCTGG TCGCGCAGCA CAAGCCTAAG
CGCAGCTGCT TCGAGATGAG TGTCGATACC AGCAATATCA GCAGTGAGAT CTTTAACGAA
TTTCGCGCCG CCATTGCCAG ACGCAGCCGC GGCTATTACG CCCCCGAGCG CTGCATTCAG
GCGGTGGAAG CGGCCTGTGA ACTGCCACTG GCCGAGGGCC TCAAGCGTGA GCATCAGCTC
TTCATGGAGT GCCTGGATAC GCCCCAGGCC CGCGCCCAGC AACATCTGTT CTTCGCCGAG
CGTGGCGTTG CCAAGATCCC TGGCATAAAC CCTAAAACCA CGGCGACCCG CGAGATCCGC
AAGGTGGCGG TGATAGGCTC AGGCACCATG GGCGGCGGCA TCGCCATGAA CTTCATCAAC
GTGGGGATCC CCACCCAGAT CCTGGACCTC AACGGCGAAG CCCTTGAACG TGGCCTTGGG
GTGATCCGCA AGAATTACGA ATACACCCTC AAGAAGGGCA AACTGAGTCA GGCCCAGCTC
GATGAGCGCA TGGCGCTGCT CAGCGGCACC ACAGATTATG CCGACATCGC CGATGTCGAC
CTGGTGATCG AAGCCGTGTT CGAGAAGATG GAGATCAAGA AGCAGGTATT TAAGACCCTG
GATGCCACCT GTAAGCCCGG CGCCATACTG GCCACCAACA CCTCCACCCT GGACGTGGAC
GAGATAGCGG CGGAGACCTC CCGCCCTCAG GACGTGCTCG GCCTGCACTT CTTCAGCCCG
GCGAACGTGA TGAGGCTGCT GGAGATAGTG CGCGCTAACA AGACGGCGCC GGATGCCCTG
CTCACTACTG TGCAGCTGGC ACAGCGGATC AAGAAAGTCC CTGTGGTCTC TGGTGTCTGC
TGGGGCTTTA TCGGCAACCG GGCGACCGAC TCTTACCTGC GTGAGTCCAT GTCGCTGATC
CTCGAAGGGG CGAGCCCGGC GCAGATAGAC AAGGTACACA CAGAGTTCGG CATGCCGATG
GGGCTGCCCT CCATGGTCGA CCTGGCCGGT ATCGATGTGG GCATCCTCAC CCGGGAAGAT
CGCAAGGCGT TCACCACAGA TCTGGACCCC AGCCACTTCG CCATACTGCA CAAGCTCTAT
GCCAAGCAGC GCTATGGTCA GAAGACGGGT CGCGGCCTCT ATATTTATGA AGGGCGCGAC
AAGCAGGAAG ATCCAGAGGT GCTTGAGCTG GCCGCCGAGG CCGCCAAGGA GTTCGGCGTG
ACCCGCCGCT CGCCAGAGCA GATAAGCGAC CAGGAGATCC TCGAGCGCAC CATCTACCCC
ATCATCAACG AAGGGGCGCG GATCCTGGAG GAAGGCATCG CCCTGCGGGC CAGCGATATC
GATATCGTGC TGGCTTACGG CTTCGGTTTC CCCATCTTCC GTGGCGGCCC CATGCAGTAT
GCCGACGAGA TAGGCCTGGA GAGGGTGCTA ACGGCGCTGA ACAAGTATCG CGACACCCTG
GACAAGGGAG AGCTGTGGTT TAAGCCTGCG CCCCTGCTGG AGCGACTAGT GAAAGAAGGC
AAGACCTTCG CCCAATACCA GGCTTAA
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| Protein sequence | MTNATLYQIH GRTAVIILNQ PPVNSLGLAL RTHLLADLKR AEADESVDAI VLASSGKLFC
GGADISEFSS DDALAEPNLP QVCDALEASP KLVVAAVNGL ALGGGCELTL ACDYRIALPA
AKLGLPEVNL GILPGAGGTQ RLPRIGGVQL ALEMITSGRP LGAAAMLDAG VIDNLYQDGG
NFIQAAVDFA QELVAQHKPK RSCFEMSVDT SNISSEIFNE FRAAIARRSR GYYAPERCIQ
AVEAACELPL AEGLKREHQL FMECLDTPQA RAQQHLFFAE RGVAKIPGIN PKTTATREIR
KVAVIGSGTM GGGIAMNFIN VGIPTQILDL NGEALERGLG VIRKNYEYTL KKGKLSQAQL
DERMALLSGT TDYADIADVD LVIEAVFEKM EIKKQVFKTL DATCKPGAIL ATNTSTLDVD
EIAAETSRPQ DVLGLHFFSP ANVMRLLEIV RANKTAPDAL LTTVQLAQRI KKVPVVSGVC
WGFIGNRATD SYLRESMSLI LEGASPAQID KVHTEFGMPM GLPSMVDLAG IDVGILTRED
RKAFTTDLDP SHFAILHKLY AKQRYGQKTG RGLYIYEGRD KQEDPEVLEL AAEAAKEFGV
TRRSPEQISD QEILERTIYP IINEGARILE EGIALRASDI DIVLAYGFGF PIFRGGPMQY
ADEIGLERVL TALNKYRDTL DKGELWFKPA PLLERLVKEG KTFAQYQA
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