Gene Shew_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2848 
Symbol 
ID4922278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3376898 
End bp3378022 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID640164445 
Productgamma-glutamyl kinase 
Protein accessionYP_001094973 
Protein GI127513776 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.910142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.563985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGA ACTTAAGTGA GATAGGCTAC CGCCGTGTGG TGGTAAAGTT GGGCACTAGC 
GTGCTCACCT CCGGATCGCG CCAGCTGGAT AAGGCGCATA TGGTTGAGCT GGCCAGACAA
ATGGCCAAGC TGATGAAGTC GGGTGTCGAA GTGGTGCTGT GCACCTCGGG CGCCATCGCG
GCCGGGCGCG AGCACTTAGG TTACCCCACA CTGCCGGATA CGGTCGCCAA CAAGCAGCTG
CTGGCGGCCG TCGGCCAGAG TCAACTGATC CTCGCCTGGT CACAGCTGTT TAGCATCTAT
GGGCTGCATG TGGGCCAGTT GCTGCTGACC CGCGCCGATC TGCACGACAG GGAGCGTTAT
CTCAACGCCA GAGACTCACT CAACGCCCTG CTGGCCAACG GCATCATTCC TATCATCAAC
GAGAACGATG CGGTGGCCAC CAACGAGATC AAGGTGGGCG ACAACGACAA CCTGTCGGCT
CGGGCGGCGC TGCTGTGTGA TGCCGACCTG CTGATCCTTT TGACGGATCA GAAGGGGCTG
TTCGATGCCG ATCCAAGGGC TAATCCGGAT GCCAAGCTTA TCAAGCAGGT GGTGAACATC
GACGACAGCC TGCGAAGCCT GGCGGGCGGC GCGGTTTCCG GCCTGGGCAC AGGTGGCATG
GCGACCAAGC TGCAGGCGGC GGATATTGCC CGCCGCGCCG GGGTCGAGGT GGTGATCGCC
TCGGGTCATC ATCCTAAGGT GATCTTAGAT GCCGTATGTC AGCTGCCGGT GGGTACTCAT
TTTACCGCGC TGGAAAATCC GCTGGAGAGC CGCAAACAGT GGATCTTGGC CGGCCCGGCG
ACCAAGGGCC GGCTGGTGCT GGACAGCGGC GCCATCAACG CCGTGACCCT GAAGGGACGC
AGCCTGCTCT CTAAGGGGAT AGTGTCGGTG AGCGGTGTGT TTGACCGCGG CGCCACCCTG
CAGCTGGTGG ACGAGCAGGG GCGGGAGCAT GCCAGGGGCA TGAGCCGTTA CAGCGCCAAA
GATCTGCAGA AGATCGCCGG TAAACATTCG GATGAAATTG AGTCGCTGCT GGGCTACGAC
TACGGCGATG CCATAGTGCA TCGTAACGAC ATGGTGGTCC TGTAA
 
Protein sequence
MSMNLSEIGY RRVVVKLGTS VLTSGSRQLD KAHMVELARQ MAKLMKSGVE VVLCTSGAIA 
AGREHLGYPT LPDTVANKQL LAAVGQSQLI LAWSQLFSIY GLHVGQLLLT RADLHDRERY
LNARDSLNAL LANGIIPIIN ENDAVATNEI KVGDNDNLSA RAALLCDADL LILLTDQKGL
FDADPRANPD AKLIKQVVNI DDSLRSLAGG AVSGLGTGGM ATKLQAADIA RRAGVEVVIA
SGHHPKVILD AVCQLPVGTH FTALENPLES RKQWILAGPA TKGRLVLDSG AINAVTLKGR
SLLSKGIVSV SGVFDRGATL QLVDEQGREH ARGMSRYSAK DLQKIAGKHS DEIESLLGYD
YGDAIVHRND MVVL