| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2844 |
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| Symbol | dnaK |
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| ID | 4922274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3371401 |
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| End bp | 3373314 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640164441 |
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| Product | molecular chaperone DnaK |
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| Protein accession | YP_001094969 |
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| Protein GI | 127513772 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.282883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0786224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAA TTATTGGTAT CGATTTAGGT ACAACTAACT CTTGTGTAGC TGTACTTGAT
GGCGATAAAG CACGCGTGAT TGAAAACGCG GAAGGCGATC GCACTACCCC GTCGATCATC
GCATATACAG GCGAAGAAGT ATTAGTTGGT CAGCCTGCGA AACGCCAAGC TGTAACAAAC
CCAAAGAATA CCTTCTTTGC TATTAAGCGT CTTATCGGTC GTCGTTTCAA AGATGACGAA
GTGCAGCGCG ACGTAGACAT CATGCCATTT AAGATCATCG CGGCAGACAA CGGTGATGCA
TGGGTTGAAG CGCACGATAA GAAGATGGCA CCGCCACAAG TTTCTGCAGA AATTCTGAAG
AAGATGAAGA AGACTGCCGA AGACTACCTG GGCGAGCCAG TAACCGAAGC GGTTATTACC
GTTCCGGCTT ACTTTAACGA TTCACAACGT CAGGCGACAA AAGACGCCGG TCGTATCGCT
GGTCTGGAAG TTAAGCGTAT TATCAACGAG CCTACTGCTG CGGCACTGGC TTACGGTATC
GATAAGAAGC AAGGTGACAA CATCGTTGCG GTATACGACT TAGGTGGTGG TACCTTCGAT
ATCTCTATCA TCGAGATCGA CAGTGTCGAT GGCGAGCAAA CTTTCGAAGT GCTTGCAACT
AACGGTGACA CTCACTTAGG TGGTGAAGAC TTCGATAACC GTCTGATCAA CTACCTGGCC
GACGAGTTCA AGAAAGAACA GTCTCTGGAT CTGCGTAACG ATCCTCTGGC GATGCAGCGT
CTGAAAGAAG CTGCCGAGAA GGCGAAGATC GAGCTGTCTA GCACGACTCA GACTGAAGTT
AACCTGCCAT ACATCACGGC TGATGCGACA GGTCCTAAGC ACTTAGTGGT TAAGATCACT
CGCGCCAAGC TTGAGTCTCT GGTTGAAGAC CTGATCCAAC GTTCACTAGA GCCGCTAAAA
GTGGCACTGG CTGACGCAGA CCTGTCTGTA TCAGACATCA ACGAAGTGAT TCTGGTGGGT
GGTCAAACCC GTATGCCTAA GGTACGTGCA GAAGTTTCAG CCTTCTTCGG CAAAGAGCTG
CGTCAAGACG TTAACCCAGA TGAAGCGGTT GCTATCGGTG CTGCGGTTCA GGCGGGTGTA
TTGGCTGGTG ACGTGAAAGA CGTACTGCTG CTAGACGTAA CGCCACTGTC TCTGGGTATC
GAAACCATGG GCAGCGTGAT GACTAAGCTT ATCGAGAAGA ACACCACTAT TCCGACTAAG
GCTAGTCAGA CCTTCTCAAC GGCAGATGAC AACCAGAGCG CGGTAACCAT TCACGTGCTA
CAGGGTGAGC GTAAGCAATC TAGCGCCAAC AAGTCGCTGG GTCAGTTCAA CCTGGAAGGT
ATCGAGCCTG CACCACGTGG CATGCCACAA ATTGAAGTGG CCTTCGATAT CGACGCCGAT
GGTATTTTGC ACGTGTCTGC GACCGACAAG AAGACGGGCA AGGCACAGAA TATCACCATC
AAGGCCTCTT CTGGTCTGAG CGATGAAGAA GTTGAAGCTA TGGTACGTGA CGCCGAGGCG
CACGCCGATG AAGATGCTAA GTTCGAAGAG CTAGTGTCTG CACGCAACCA AGCTGACGGC
ATGGTTCACG CGACTAAGAA GCAGATCGAA GAAGCGGGCG ATGCACTGCC AAGCGAAGAC
AAAGAGAAGA TCGAAGCTGC GATGGCTGAC GTCGACACTG CCACTAAGGG CAACGACAAA
GAAGCTATCG AAAAGGCAAC GCAAGCCCTG ATGGAAGCGT CTGCCAAGCT GATGGAGATC
GCTCAGGCTA AGGCGCAAGC TGGCCAAGGC GAGCAGGCTC AGCAGTCTAA CGAAGCTCCT
GCTGATGATG TTGTCGATGC CGAGTTTGAA GAAGTTAAAG ACGACAAAAA ATAA
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| Protein sequence | MGKIIGIDLG TTNSCVAVLD GDKARVIENA EGDRTTPSII AYTGEEVLVG QPAKRQAVTN
PKNTFFAIKR LIGRRFKDDE VQRDVDIMPF KIIAADNGDA WVEAHDKKMA PPQVSAEILK
KMKKTAEDYL GEPVTEAVIT VPAYFNDSQR QATKDAGRIA GLEVKRIINE PTAAALAYGI
DKKQGDNIVA VYDLGGGTFD ISIIEIDSVD GEQTFEVLAT NGDTHLGGED FDNRLINYLA
DEFKKEQSLD LRNDPLAMQR LKEAAEKAKI ELSSTTQTEV NLPYITADAT GPKHLVVKIT
RAKLESLVED LIQRSLEPLK VALADADLSV SDINEVILVG GQTRMPKVRA EVSAFFGKEL
RQDVNPDEAV AIGAAVQAGV LAGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK
ASQTFSTADD NQSAVTIHVL QGERKQSSAN KSLGQFNLEG IEPAPRGMPQ IEVAFDIDAD
GILHVSATDK KTGKAQNITI KASSGLSDEE VEAMVRDAEA HADEDAKFEE LVSARNQADG
MVHATKKQIE EAGDALPSED KEKIEAAMAD VDTATKGNDK EAIEKATQAL MEASAKLMEI
AQAKAQAGQG EQAQQSNEAP ADDVVDAEFE EVKDDKK
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