| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2843 |
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| Symbol | |
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| ID | 4922273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3370122 |
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| End bp | 3371252 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164440 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001094968 |
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| Protein GI | 127513771 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0744929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0660711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGC GAGATTATTA CGAAGTATTG GGCGTAGGTC GCGACGCCAG CGAGCGTGAG
ATTAAGAAGG CCTATAAGCG CCTCGCCATG AAATTTCACC CGGACCGTAA CCCAGGTGAC
AAGGCGGCCG AAGCCAGCTT CAAAGAGGTA AAAGAAGCCT ACGAAATTCT AACCGACAGC
GATAAGAAGG CGGCCTATGA CCAGTTTGGT CATGCGGGAG TCGATCCTAA CCGCGGCGGT
GGCGGATTTG GCGGCGGCGC CGACTTCGGT GATGTATTCG GTGACGTATT TGGTGACATC
TTCGGTGGTG GACGCCGTGG TGGCCAGCGT CAGGCGGCGC GCGGCTCAGA TCTGCGTTAC
AACCTGGAAC TGTCACTGGA AGAGGCGGTG CGTGGCCTGA CCAAAGAGCT ACGCATTCCA
ACCTTAGCCA CCTGTGACCT CTGTGACGGT AGCGGCGCCA AGAAAGGCAG CTCTCCGACC
ACATGTGGTA CCTGTCACGG TCAGGGCCAG GTGCAGATGC GCCAAGGTTT CTTCGCTGTG
CAGCAAGCCT GTCCTACCTG TCATGGCCGC GGTAAGATCA TCAAAGATCC TTGCGGTAAG
TGTCATGGCG AAGGCCGCGT AGAGAAGAGC AAGACACTGT CGGTGAAAAT TCCTGCGGGT
GTGGATACCG GCGATCGCAT TCGTCTGTCG GGCGAAGGGG AAGCGGGCGA GTTTGGCGCG
CCTCCAGGGG ATCTCTATGT ACAGGTCACA GTGCGTGAGC ATGCCATCTT CGTACGTGAC
GGTAACAACC TTTACTGCGA AGTGCCTATC TCATTTAGCA CGGCGGCATT GGGCGGCGAG
ATCGAAGTGC CGACACTTGA TGGCAAGGTC AACCTGAAGA TCCCATCGGA AACTCAGACC
GGTCGTATGT TCCGTCTGCG TGGCAAAGGG GTCAAGTCGG TGCGCAGCCA TGCGGTTGGC
GACCTATTGT GTAAGGTGGT GATGGAAACG CCTGTGAACC TGAACGACAA GCAGAAAGAG
CTGCTACGTG AGTTCGATAA CACCCTGACG GGTTCATCAA AGAAGCACAG CCCTAAGGCG
GAAGGCTTCT TCGATGGCGT GAAGAAGTTC TTTCAGGACT TGAACAGCTA A
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| Protein sequence | MSKRDYYEVL GVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEV KEAYEILTDS
DKKAAYDQFG HAGVDPNRGG GGFGGGADFG DVFGDVFGDI FGGGRRGGQR QAARGSDLRY
NLELSLEEAV RGLTKELRIP TLATCDLCDG SGAKKGSSPT TCGTCHGQGQ VQMRQGFFAV
QQACPTCHGR GKIIKDPCGK CHGEGRVEKS KTLSVKIPAG VDTGDRIRLS GEGEAGEFGA
PPGDLYVQVT VREHAIFVRD GNNLYCEVPI SFSTAALGGE IEVPTLDGKV NLKIPSETQT
GRMFRLRGKG VKSVRSHAVG DLLCKVVMET PVNLNDKQKE LLREFDNTLT GSSKKHSPKA
EGFFDGVKKF FQDLNS
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