| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2840 |
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| Symbol | |
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| ID | 4922347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3367447 |
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| End bp | 3368262 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164437 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_001094965 |
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| Protein GI | 127513768 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000040359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0597866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC AAGTAAGAGT GGCGATAACC GGTGGCAGTG GTCGCATGGG CCGAACTCTT
ATTGAATCGG CAAAACTCAG CAGCAATATC TATTTAGGTG CGGCGGTTGA GCGTGCGGGT
TCCACATTGA TAGGTGTCGA TGCGGGCGAA CTCGCCGGTG TGGGCGCGAT GAATGTTGCC
ATCACTGATT CGCTGGACAA TGCCGTAGAC GACTTCGATA TCCTGATCGA TTTTACCTCA
CCCGAGGCCA GTGTGGTGCA TACCGACTGG TGTTCCCGCA ACGGTAAGGC GATCGTCATC
GGCACCACAG GCTTTAATCA TGCCCAGAAA GAGCAGATTG CCGCCTACGC CGAGAACACG
CCGATCGTGA TGGCGCCTAA CATGTCTGTG GGGGTCAACC TGATGTGGCG CCTGCTGGAG
CTGGCCGCCG AGGTGATGGG CGACTACACA GATATCGAGA TCATCGAGGG TCACCACAGA
CATAAGAAAG ATGCGCCGTC GGGTACAGCA CTCAAGATGG GCGAGGTGAT CGCCGAAGTC
TTGGGGCGCG ACCTGGAAAA ATGCGCCGTC TATGGCCGTG AAGGGATCAC CGAAGAGCGT
AGCCGTGAGA CCATAGGCTT CTCTACCATT CGCGCCGGCG ATTTGGTGGG TGAGCACACC
GCCATGTTTG CCGATATCGG TGAGCGTCTG GAGATCACCC ATAAGGCCTC GAGTCGAATG
ACCTTTGCCA ACGGTGCCAT GCGCGCCGCA TTTTGGCTGG GTGATCAGGG CCCCGGATTA
TACGACATGC AACAGGTCTT GGGCCTGAAG GATTAG
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| Protein sequence | MTEQVRVAIT GGSGRMGRTL IESAKLSSNI YLGAAVERAG STLIGVDAGE LAGVGAMNVA
ITDSLDNAVD DFDILIDFTS PEASVVHTDW CSRNGKAIVI GTTGFNHAQK EQIAAYAENT
PIVMAPNMSV GVNLMWRLLE LAAEVMGDYT DIEIIEGHHR HKKDAPSGTA LKMGEVIAEV
LGRDLEKCAV YGREGITEER SRETIGFSTI RAGDLVGEHT AMFADIGERL EITHKASSRM
TFANGAMRAA FWLGDQGPGL YDMQQVLGLK D
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