| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2830 |
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| Symbol | secG |
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| ID | 4920682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3355338 |
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| End bp | 3355682 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640164427 |
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| Product | preprotein translocase subunit SecG |
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| Protein accession | YP_001094955 |
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| Protein GI | 127513758 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1314] Preprotein translocase subunit SecG |
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| TIGRFAM ID | [TIGR00810] protein translocase, SecG subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000815505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00315875 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTACGAAG TTCTAATGGT TATTTACTTG TTGGTTGCGT TGGGCCTGAT TGGCTTGATC
CTCATCCAGC AAGGTAAGGG AGCTGACATG GGGGCCTCTT TCGGCGCCGG TGCATCAGCC
ACTCTATTCG GTTCTTCTGG TTCGGGTAAC TTTTTAACTC GTTCCACTGC GATACTGGCA
ATTGCCTTCT TTGCCCTGAG TCTGACGATT GGCAACTTGA GCGCAAACCA CGCTAAAACC
GAAGAGTCTT GGAAAGATTT AGGTGCCGAT GCGGCGGCCG TAACTGAGCA AGTTACCGAT
GCAGCAAAAG ACGCACAAAA GTCAGAAGAT AAGATCCCTG ACTAA
|
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| Protein sequence | MYEVLMVIYL LVALGLIGLI LIQQGKGADM GASFGAGASA TLFGSSGSGN FLTRSTAILA
IAFFALSLTI GNLSANHAKT EESWKDLGAD AAAVTEQVTD AAKDAQKSED KIPD
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