| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2827 |
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| Symbol | infB |
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| ID | 4922334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3350124 |
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| End bp | 3352781 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164422 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001094952 |
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| Protein GI | 127513755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00613346 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGATA CCACAGTAGC AAAACTGGCC GAAGAAGTAG GGAAGAGTGC TGATCGCTTA
GTTGAGCAGT TTTCTGAGGC CGGTATTAAG AAGAGTAAGA CCGACACAGT TTCAGAAGAT
GAAAAGCAGA AGTTGCTTGA GTTTTTGAAG AAGCAACATG GTGGCGATTC AGCGCCAACC
AAGATGACAC TGCAGCGCAA GTCTATCTCG ACACTGAGCG TGTCGGGTAG CGGCGGCCAG
TCGAAAGATA TCAAGGTAGA AGTGCGTAAG AAGCGTACCT TCGTCAAGCG TGATGTAGCG
GCTGAAGCCG AGGCAGAAGC TAAGGCTAAG GCAGAAGCCG AAGCTAAGGC AGCTGCCGAA
GCAGAAGCTA AGGCCAAGGC AGACGCGGAA GCCAAGGCGA AAGCTGAGGC GGAAGCCGCA
GCAAAAGCTA AGGCTAAGGC CGAGGCAGAA GCTAAGGCGA AGAAGGCTGC AGAAGGTAAG
CCTGCTGCTG AAGAAACTGC AGAAGAGAAA GCCGCCAAGG TGGAAGAAGC TCGCCTGCTA
GCGGCTAAAG AAGCTGCCGC TAAGGCTAAG GCGGATGAAG AAGCTAAGGC TGCAGCCGAA
GAAGCACGTC GTCTTGCCGA AGAGAACGAG AAGCGTTGGG CAGAAGAAGA GCGTCTGCGT
AAAGAATCTG AAAACAGCGC CGATCACCAT GTGACCACAT CGACTGAAGC GCGCGCCGCC
GAAGATTCGG CGGACAGAGA TGCCGAGCGA CGTGGTCGCC GTGCGCGTAA GCCTGCCGGT
GGCAAGAAAG AGCCTATCGG CAAGAAGCGT GGCGGTAAAG AAGCCCGTGG TGGTCGTAAC
AACCGTAATC AGCGCAATGC GCCAGAGTCG ATGGACCATG GCTTTAACAA GCCTGCTGCG
GCCGTTACCC GTGACGTGAC TATCGGCGAA ACCGTAACGG TTGCCGAGCT GGCACAGAAG
ATGGCGGTTA AGGCGACCGA GATCATCAAG CAGATGATGA AGATGGGCTC TATGGTTACC
ATCAACCAGG TACTGGATCA GGAAACTGCG CAGCTGGTTG CCGAGGAGAT GGGCCACAAG
GTGGTTCTGA CTCGTGAAAA CGAGCTTGAG CATCAAGTAC TCGCCGACCG TGACGGCAAC
GTTAAGGTTG AGCCTCGTGC GCCAGTTGTG ACCATCATGG GTCACGTTGA CCATGGTAAG
ACATCGCTAC TCGACTATAT TCGTCGCGCT AAGGTGGCTT CTGGTGAGGC GGGTGGTATT
ACCCAGCACA TCGGTGCATA CCATGTTGAA ACCGACAATG GCATGATCAC CTTCCTGGAT
ACCCCAGGTC ACGCCGCGTT TACCGCGATG CGTGCACGTG GTGCCAAGGC GACCGATATC
GTGGTGCTGG TAGTAGCCGC CGATGATGGC GTGATGCCAC AGACCATCGA AGCGATTCAG
CACGCTAAGG CGGGCGGTGT ACCGCTTATC GTTGCGGTGA ACAAGATTGA TAAGCCAGAA
GCGGATCCTG ATCGCGTTAA GTCTGAACTG TCTCAACATG GCGTGATGTC AGAAGATTGG
GGCGGAAACA ACATGTTCGT TCACGTGTCT GCTAAGTCTG GTGAAGGTAT CGACGAGCTG
CTGGAAGGCA TCTTGCTTGA AGCCGAAGTA CTTGAACTGA AAGCAGTACG CGAAGGCATG
GCAGCTGGCG TTGTGGTTGA GTCTAAGCTA GACAAGGGCC GCGGTCCTGT AGCGACTATC
CTGGTACAAG AAGGTACCCT GAAGCAGGGC GATATCGTTC TTTGTGGCCT GGAGTACGGT
AAAGTCCGTG CGATGAAGGA TGAGAACGGT AAGTCGATCA CCGAAGCCGG TCCATCGATT
CCAGTTGAGA TCTTAGGTCT TTCTGGTGTG CCATCTGCCG GTGATGAAGC GACAGTTGTT
CGTGACGAGC GTAAGGCTCG TGAAGTGGCT CTTTACCGTC AAGGTAAGTT CCGTGACGTC
AAACTGGCCC GTCAGCAGAA GTCTAAGCTT GAGAACATGT TCGCTAACAT GACCGAAGGC
GAAGTCCAAG AGCTGAACAT AGTGCTTAAG GCCGACGTAC AAGGCTCGCT GGAAGCGATT
TCTGACTCGC TCAACAAGCT GTCTACCGAT GAGGTGAAGG TTAACATCAT CGCCAGCGGT
GTAGGTGGAT TGACCGAGAC CGATGCGACC CTGGCGGCTG CGTCAAACGC TATCATGGTT
GGTTTCAACG TTCGTGCCGA TGCACAGGCG CGTAAGACGA TTGAAAGCGA GAGCGTTGAC
CTGCGTTACT ACAGCGTTAT CTATCATCTG ATCGATGAAG TTAAGGCGGC GATGGGCGGC
ATGTTGGCAC CTGAGTTCAA GCAAGAGATC ATCGGTCTTG CCGAAGTGCG TGACGTGTTC
AAGTCGCCTA AGATTGGTGC TATCGCAGGT TGTATGGTTA CCGAAGGTAC CATCAAGCGT
AGCGCGCCAA TCCGTGTACT ACGTGACAAC GTAGTGATCT TCGAAGGTGA GCTAGAATCA
CTGCGTCGCT TCAAGGATGA CGTTAACGAA GTTCGTAACG GTATGGAGTG TGGTATCGGC
GTGAAGAACT ATAATGACGT CAAAGTTGGC GATCAGATTG AGGTCTTCGA AACGGTCGAA
ATCGCTCGAA CCTTATAA
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| Protein sequence | MADTTVAKLA EEVGKSADRL VEQFSEAGIK KSKTDTVSED EKQKLLEFLK KQHGGDSAPT
KMTLQRKSIS TLSVSGSGGQ SKDIKVEVRK KRTFVKRDVA AEAEAEAKAK AEAEAKAAAE
AEAKAKADAE AKAKAEAEAA AKAKAKAEAE AKAKKAAEGK PAAEETAEEK AAKVEEARLL
AAKEAAAKAK ADEEAKAAAE EARRLAEENE KRWAEEERLR KESENSADHH VTTSTEARAA
EDSADRDAER RGRRARKPAG GKKEPIGKKR GGKEARGGRN NRNQRNAPES MDHGFNKPAA
AVTRDVTIGE TVTVAELAQK MAVKATEIIK QMMKMGSMVT INQVLDQETA QLVAEEMGHK
VVLTRENELE HQVLADRDGN VKVEPRAPVV TIMGHVDHGK TSLLDYIRRA KVASGEAGGI
TQHIGAYHVE TDNGMITFLD TPGHAAFTAM RARGAKATDI VVLVVAADDG VMPQTIEAIQ
HAKAGGVPLI VAVNKIDKPE ADPDRVKSEL SQHGVMSEDW GGNNMFVHVS AKSGEGIDEL
LEGILLEAEV LELKAVREGM AAGVVVESKL DKGRGPVATI LVQEGTLKQG DIVLCGLEYG
KVRAMKDENG KSITEAGPSI PVEILGLSGV PSAGDEATVV RDERKAREVA LYRQGKFRDV
KLARQQKSKL ENMFANMTEG EVQELNIVLK ADVQGSLEAI SDSLNKLSTD EVKVNIIASG
VGGLTETDAT LAAASNAIMV GFNVRADAQA RKTIESESVD LRYYSVIYHL IDEVKAAMGG
MLAPEFKQEI IGLAEVRDVF KSPKIGAIAG CMVTEGTIKR SAPIRVLRDN VVIFEGELES
LRRFKDDVNE VRNGMECGIG VKNYNDVKVG DQIEVFETVE IARTL
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