| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2826 |
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| Symbol | rbfA |
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| ID | 4922333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3349577 |
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| End bp | 3349999 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164421 |
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| Product | ribosome-binding factor A |
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| Protein accession | YP_001094951 |
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| Protein GI | 127513754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0858] Ribosome-binding factor A |
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| TIGRFAM ID | [TIGR00082] ribosome-binding factor A |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.620262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00369289 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAGAG AATTTAGTCG TACTCGTCGC ATCGCTCAGC AGCTGCAACA GGAGCTGGCT
CAGGTGCTGC AACGGGACAT CAAAGATCCG CGTATCGGTA TGGTGACGGT TAACGACGTC
GATGTATCTC GCGATCTGAA CTACGCCAAG GTCTATGTCA CCTTCTTCGA GGAAGACAAG
GCGGTTGTAG AAGAAAAGCT GGCGGCGCTG GAAGCGGCCG CGGGTTATGT TCGCTCTCTG
GTGGCGGGTC GTATGAAGCT TAGGGTCATG CCCGAAATCC GCTTCATCTA CGATGCCTCG
CTGATCGAGG GGATGCGCAT GTCTAACCTG GTGAGTCAGG TGATCACCAA GGATAAGGCT
AAGGCGGCTG AACACGGTCG TGAAGACGAA GAGCTGGACG ACACCGAGCA GGACGATAAA
TAA
|
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| Protein sequence | MAREFSRTRR IAQQLQQELA QVLQRDIKDP RIGMVTVNDV DVSRDLNYAK VYVTFFEEDK
AVVEEKLAAL EAAAGYVRSL VAGRMKLRVM PEIRFIYDAS LIEGMRMSNL VSQVITKDKA
KAAEHGREDE ELDDTEQDDK
|
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