| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2817 |
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| Symbol | |
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| ID | 4922487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3338227 |
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| End bp | 3339486 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164412 |
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| Product | nucleoside transporter |
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| Protein accession | YP_001094942 |
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| Protein GI | 127513745 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000683947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000493259 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATTT TAATGAGTTT AGTAGGGGTG GTCGTCCTAC TCGCGATAGG TTTTTTGCTT
TCTAACAACA AAAAAGCTAT CAACATGCGT ACCGTATTTG GTGCACTTGC GATTCAGGCA
TTCTTTGCAG GTTTCGTACT GTACGTACCT ATCGGTAAAG ACATTCTAAA AAGTGTTTCA
GATGGCGTAT CTAGCGTTAT CGGTTACGCA CAAAACGGTA TCGGCTTCCT GTTCGGCGAT
CTGGCTAACT TCAAAGTGGG CTTCATCTTC GCTATCAACG TACTGCCTGT TATCGTCTTC
TTCTCATCGC TGATCGCGGT ACTTTACTAC CTGGGCATCA TGCAGTGGAT CATCCGTATC
ATCGGTGGTG GTCTGCAGAA AGCTCTGGGT ACTAGCCGTA CTGAGTCTAT GTCAGCGACT
GCTAACATCT TCGTTGGTCA AACTGAAGCG CCACTGGTTG TTCGTCCATT CATCGCGACT
ATGACTCAAT CTGAGCTGTT CGCTATCATG GTGGGTGGTC TAGCCTCTAT CGCTGGTTCA
GTATTGGCTG GTTACGCGCA GATGGGTGTG CCTATCGAGT ACCTAGTTGC TGCATCATTC
ATGGCTGCAC CTGGTGGTCT ATTGATGGCT AAGCTAATGC ATCCTGAAAC AGAGAAAACT
GTTAACGAAA TGGATGAGCT GCCAGAAGAT CCAGACAAGC CAGCTAACGT ACTTGACGCT
GCTGCTGCCG GTGCTTCATC TGGTATGCAC CTAGCTCTGA ACGTTGGTGC TATGCTGCTA
GCCTTCGTTG GTCTGATTGC GATGATCAAC GGTATTATCG GTGGCGTAAC TGGTCTGTTC
GGTGCGGAAG GTATCACCCT AGAGCTGATC CTTGGTTACA TCTTCATGCC ACTTGCATTC
CTAATCGGTG TGCCTTGGAA CGAAGCGCTT ATCGCAGGTT CTTTCATCGG TCAGAAGATC
GTTGTTAACG AATTCGTTGC TTACCTGAAC TTTGCTCCAT ACCTGAAAGA CGTTGCTGAC
GGTGGTCTGC TAGTTGAAGC GACTAACGCT GTAATGACTG ACAGAACTAA GGCAATCATT
TCATTCGCTC TGTGTGGTTT CGCGAACCTG TCTTCTATCG CGATTCTACT GGGTGGTCTA
GGTGCAATGG CTCCTACCCG TCGTCACGAC CTAGCTAAGC TTGGTATCCG TGCGGTGATA
GCTGGCTCTC TGGCTAACCT AATGAGTGCA ACGCTAGCGG GTCTGTTCCT AGCGTTATAA
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| Protein sequence | MDILMSLVGV VVLLAIGFLL SNNKKAINMR TVFGALAIQA FFAGFVLYVP IGKDILKSVS
DGVSSVIGYA QNGIGFLFGD LANFKVGFIF AINVLPVIVF FSSLIAVLYY LGIMQWIIRI
IGGGLQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIAT MTQSELFAIM VGGLASIAGS
VLAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETEKT VNEMDELPED PDKPANVLDA
AAAGASSGMH LALNVGAMLL AFVGLIAMIN GIIGGVTGLF GAEGITLELI LGYIFMPLAF
LIGVPWNEAL IAGSFIGQKI VVNEFVAYLN FAPYLKDVAD GGLLVEATNA VMTDRTKAII
SFALCGFANL SSIAILLGGL GAMAPTRRHD LAKLGIRAVI AGSLANLMSA TLAGLFLAL
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