| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2813 |
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| Symbol | |
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| ID | 4922483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3333109 |
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| End bp | 3334326 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164408 |
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| Product | phosphopentomutase |
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| Protein accession | YP_001094938 |
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| Protein GI | 127513741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00335296 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000382336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAAGAA CTGTCATTAT GATGCTCGAC TCTTTCGGAG TCGGTGCGGC AAAAGATGCT
GAAGCCTTTG GGGACACAGG TTCAAACACC TTTGGTCATA TTGCTAAGGC ATGTGCCGAA
GGCAAGGCCA ACGATGGTCG TGAAGGCCCG CTTAAGCTAC CTAACCTGGC CAAGCTTGGC
CTGGCACTGG CCGCTAAAGA GAGCACAGGC AGCTTTGCTG AAGGCTTCGG TGACGATGTC
GAAGTGATTG GTGCCTACGG TCATGCCGAT GAGCTGAGCT CGGGTAAAGA TACCCCGAGC
GGTCACTGGG AGATGGCGGG TGTTCCCGTT CTGTATGAGT GGGGCTATTT TAGCGACCTG
AAAGACTCTT TCCCTAAAGA GTTGACCGAC AAGATCCTTG AGCGCGCCGG TCTATCAGGC
TTCCTGGGTA ACTGCCACGC CTCAGGCACG GCGATCCTCG AAGAGTTAGG CGAAGAGCAT
ATGACCTCTG GTCTACCTAT CTTCTATACC TCGGCGGACT CTGTGTTCCA GATCGCCTGT
CACGAAGAGA CATTTGGTCT GGAAAACCTC TACACCTTGT GTCAAATAGC CCGTGAAGAG
CTTGAGCCTT ACAATATCGG CCGTGTTATC GCCCGTCCAT TCGTTGGCAC AGGCCCAAGC
GATTTCGCCC GTACCGGTAA CCGTAAAGAT TACGCGGTCG AGCCACCATC AAAGACGGTT
CTCGATAAGC TGAAAGAGGC CGGTGGTGAG GTGGTTAGCG TGGGTAAGAT TGCCGATATC
TATGCGCACT GCGGTATCAC CAAGAAGGTG AAGGCCACAG GTTTGGAAGC TTTGTTCGAT
GCGACCCTGG AGCAGGTGAA GCAAGCGGGT GACCGTACTA TCGTGTTCAC TAACTTCGTC
GATTTTGACT CTCATTACGG CCACCGCCGT GACATCGCCG GTTATGCCCG CGCGCTGGAG
TACTTCGACA GCCGTCTGCC AGAGATGTTG GCACTGCTGG GTGAAGAGGA TCTACTGCTG
CTGACCGCAG ACCATGGTTG TGACCCAACC TGGCAGGGTA CAGACCACAC CCGTGAGCGC
GTGCCAGTAC TTGCCTATGG CGCGGGTCTA GCACCCGGTT CACTGGGTCG TCGTAACAGT
TTCGCTGATA TCGGCCAGAG CATTGCGAGC TACTTCGGTC TAGAGCCTAT GGAATATGGC
GAGTCATTCG TCGCCTAG
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| Protein sequence | MKRTVIMMLD SFGVGAAKDA EAFGDTGSNT FGHIAKACAE GKANDGREGP LKLPNLAKLG
LALAAKESTG SFAEGFGDDV EVIGAYGHAD ELSSGKDTPS GHWEMAGVPV LYEWGYFSDL
KDSFPKELTD KILERAGLSG FLGNCHASGT AILEELGEEH MTSGLPIFYT SADSVFQIAC
HEETFGLENL YTLCQIAREE LEPYNIGRVI ARPFVGTGPS DFARTGNRKD YAVEPPSKTV
LDKLKEAGGE VVSVGKIADI YAHCGITKKV KATGLEALFD ATLEQVKQAG DRTIVFTNFV
DFDSHYGHRR DIAGYARALE YFDSRLPEML ALLGEEDLLL LTADHGCDPT WQGTDHTRER
VPVLAYGAGL APGSLGRRNS FADIGQSIAS YFGLEPMEYG ESFVA
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