Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2804 |
Symbol | |
ID | 4922538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3322456 |
End bp | 3322824 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640164399 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001094929 |
Protein GI | 127513732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00120392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGAAC GGCGGCAATT TTCGCGCATC TTCTTCGATG TCGATGCGGC GCTCACCCAA GAAGATAAGG TGTGGTCAAC CAAGCTGCAC GATCTTAGCC TGAATGGTGC CCTGGTCGAG CAGCCCCAAG AGTTCGCGCC AAATCCGGCG CCAATACTCC TGAGTTTCAC CCTAGAAGGC TCGGATGTCG AGGTCACCAT GGAGACCCAG GTGATCCACC GTCAAGATGG CCAACTCGGC CTCGAATGCC TGCATATCGA TATCGACAGC ATCAGCCACT TAAGGCGTAT GCTCGAGCTC AACACAGGCG ATGCCTCCCT ACTCGACCGT GAACTCAAGA TGTTTATCGA GGTACATGAT CAGGGCTGA
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Protein sequence | MNERRQFSRI FFDVDAALTQ EDKVWSTKLH DLSLNGALVE QPQEFAPNPA PILLSFTLEG SDVEVTMETQ VIHRQDGQLG LECLHIDIDS ISHLRRMLEL NTGDASLLDR ELKMFIEVHD QG
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