Gene Shew_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2804 
Symbol 
ID4922538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3322456 
End bp3322824 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content54% 
IMG OID640164399 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001094929 
Protein GI127513732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00120392 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGAAC GGCGGCAATT TTCGCGCATC TTCTTCGATG TCGATGCGGC GCTCACCCAA 
GAAGATAAGG TGTGGTCAAC CAAGCTGCAC GATCTTAGCC TGAATGGTGC CCTGGTCGAG
CAGCCCCAAG AGTTCGCGCC AAATCCGGCG CCAATACTCC TGAGTTTCAC CCTAGAAGGC
TCGGATGTCG AGGTCACCAT GGAGACCCAG GTGATCCACC GTCAAGATGG CCAACTCGGC
CTCGAATGCC TGCATATCGA TATCGACAGC ATCAGCCACT TAAGGCGTAT GCTCGAGCTC
AACACAGGCG ATGCCTCCCT ACTCGACCGT GAACTCAAGA TGTTTATCGA GGTACATGAT
CAGGGCTGA
 
Protein sequence
MNERRQFSRI FFDVDAALTQ EDKVWSTKLH DLSLNGALVE QPQEFAPNPA PILLSFTLEG 
SDVEVTMETQ VIHRQDGQLG LECLHIDIDS ISHLRRMLEL NTGDASLLDR ELKMFIEVHD
QG