| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2797 |
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| Symbol | |
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| ID | 4922531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3311331 |
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| End bp | 3312509 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164392 |
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| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
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| Protein accession | YP_001094922 |
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| Protein GI | 127513725 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.135718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGT TTATCACCCT TTGGCGTACC CTCAACAAAC CCGCCAAAAC CCTCACCCTT
GGCGCCATTA GCCTGTCAGC CTTCCTGATG GGCATCATCT TTTGGGGTGG CTTCAACACC
GCCTTGGAGG CGACCAACAC CGAAGCCTTC TGCATCAGCT GCCACAGCAT GGAGAGTAAA
CCCTACCAGG AGCTGCAAAG CACAGTGCAT TGGTCGAATC ACTCAGGCGT GCGCGCCACC
TGCCCCGACT GTCACGTGCC CCACAACTGG AGCCGTAAGA TTGGCCGCAA GATAGAGGCC
TCCCACGACA TGTGGGGCTG GCTGCTACAA ACCGTCAATA CCGAAGAGAA ATTCGAGGCC
AAGCGTCTGG AAATGGCGAG CCGTGAGTGG AAACGTTTCG ATCGCGACAA CTCACTCGCC
TGTAAGAACT GCCACAACTA TGACTCGATG AAGTGGGACG AGATGTCTAA GCTGGCCCAG
AAGCAGATGA AACGCGCCGC CGAGTTGGAT CAGAGCTGTA TCGACTGCCA CAAGGGGATC
GCCCACAAGC TGCCTGACAT GGGCACCTCT CGCGCTCCTG AACTTATCGC CCAGGTGGGG
TCTGGCGAGA GCAGCCTGGC TATCGGCGAA AGCTACTTCA GCGCCCTGAC CAAGCCACTG
TTCTTCAACG AGAAGACAGA CGTCGAGGCG GGCACACTCA ACATCGCCAC TAAGGTGAAG
GTGCTTGAGG TCAAGGGTCA ACGCGCCAAG GTAGGTATCG ATGGCTGGCG CAAGAAGATA
GGCGCAGGCC GGGTGATCTA CTTTGATTTC GGCATGAACA TCCTCTCGGC CCAGCTCTCG
AAAGATGCCG CCCTAGAGCC AGGCGTGATG CAAGTGTTCG AAGAGCAGCA AGACCCGCTC
ACCGGCCTGA TCTGGCAGCG CGTCGAGGCG CAGATCTGGG TGGATGGCGA CTATCTGGTC
AAAGATCTGC AACCACTCTG GGATTACGCC CGCGACACTT ACTCCAGCAG CTGTAGTGTC
TGTCACACCC AGCCCGATGA GGCCCATTTC GACGCCAACA CCTGGCCCGG CATGTTTCAG
GGAATGATCG CCTTCGTCAA CATGGACCAA GACACCCAGG CACTGGTGCA GAAATACCTG
CAAGAACATT CATCGACTTT TGCCACCTCA GCGCACTAA
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| Protein sequence | MKWFITLWRT LNKPAKTLTL GAISLSAFLM GIIFWGGFNT ALEATNTEAF CISCHSMESK
PYQELQSTVH WSNHSGVRAT CPDCHVPHNW SRKIGRKIEA SHDMWGWLLQ TVNTEEKFEA
KRLEMASREW KRFDRDNSLA CKNCHNYDSM KWDEMSKLAQ KQMKRAAELD QSCIDCHKGI
AHKLPDMGTS RAPELIAQVG SGESSLAIGE SYFSALTKPL FFNEKTDVEA GTLNIATKVK
VLEVKGQRAK VGIDGWRKKI GAGRVIYFDF GMNILSAQLS KDAALEPGVM QVFEEQQDPL
TGLIWQRVEA QIWVDGDYLV KDLQPLWDYA RDTYSSSCSV CHTQPDEAHF DANTWPGMFQ
GMIAFVNMDQ DTQALVQKYL QEHSSTFATS AH
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