| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2792 |
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| Symbol | |
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| ID | 4922726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3305141 |
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| End bp | 3306958 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164387 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001094917 |
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| Protein GI | 127513720 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.418841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGGG TGTCTCCATC ACGGGCACCA TCCCTTACAC AGCGAGCAGA CCCCATGCAA
AAGATGATTT TCACCGTAGA CGATGTGGTA GCCAACAACC TGCCCAAGCT CAATCAGAGC
CCCTGGCTGG CGACCCCCAC CAAGGCGCTG CTGCGCTATT TCCTGATGGA AAAAGAGTGC
CATGCCATCA CCCAGGAGTT CGATTACCTG GAGGGGGTAG ACTTTATCGA GCAGGTCCTG
GCCAGCTTCA ACTTCACCTA CAGCATGCCC AGCACAGAGG TGGAGAATAT CCCCAGCGAG
GGGCGGGTGG TGATCTATGC CAACCACCCT ATCGGCTCAC TGGACGCCCT GGCGATGATC
AAGCTGATCA GCAAGGTGCG CCCCGACATC AAGGTGGTGG CCAACGAGCT ACTGATGGCC
CTGGAGCCGC TGCACTCCAT CCTGCTGCCG GTGCGTAACA TGACGGGCGG CACCCCCAAA
CAGCATCTGG AGAAGATCCA CCAACACCTC AAGAGCGAAG GCGCCGTGCT GATCTTCCCC
TCCGGCGAAG TCTCACGCCT GCGCCCCAAC GGCGTGAGGG ACCTGCACTG GCACAGCGGC
TTTCTGAAGA TCGCCAAGGC CTGTCAGGCG CCGCTGCTGC CCATGTTTGC CGATGCCAAG
AACTCGGCCA CCTTCTACGG TGCCTCGATG ATCTACAAGC CCCTGGCCAG CCTGCTGCTT
GTCAAGGAGA TGTTCAAGCA GGCCAAGCGC ACCATGCCCC TGCGCATAGG CCAGCTGATC
CCCAAGGAGG TGGTGGCTAG CAGCGACTTC CCGCTCAAGA CCCAGGTGAA GCTGCTGAAG
AATCATCTCT ACCGTATCGG CAAGAACCGC AGCCCACTGT TTAAGACCCA GAACGCCATC
GCCCACCCTG AGTCGCGCAG CGATCTGATC GAGGCGCTGT CTCAGTGCGA ACTGCTGGGC
CAGACCCATG ACGAGAAACT CATCTATCTC TACCGCCACA AGCAGAGCAA TCCCATCATG
CGTGAGATAG GCAGGCTGAG AGAGATCGCC TTTCGCGCCG TGGGCGAAGG CAGCGGCAAG
CGCCGCGACA CAGACAAGTA CGACGCCGAC TACCTGCATC TGGTGCTCTG GGATCACAAG
GCGCTGGAGA TCGTCGGCGC CTACCGTTTC GCCAGTGCCA AGAGCCTCTA CCAGGATGAG
CATAAGGGCC TCTACAGCCA GTCGCTGTTT CAGTACCGCG ACGAGTTCGC CCCCTACTTC
GAGCAGGGGC TGGAGCTGGG ACGCAGCTTT GTGCAGCCTA AGTATTGGGG CAAGCGCAGC
CTGGATTACC TCTGGTTCGG CATAGGCGCC TTCCTCGCCA AACATCCAGA GTATCGTTAC
CTGTTCGGTC CCGTCTCCAT CAGCGACGCC CTGCCGGAGC AGGCCAAGGC GATGTTGGTC
TACTTCTACC AGACCCACTT CTGCCCGGTG CAGGAGCTGG CCCACGCCAA CAGCCGCTAC
AGCTTTACCC CAGAGCAGCA CGAACAGTTA GATAGCCTCT TCCCCGGCGA AGACTATCAG
GCGGAATTTA AGCTGCTCAA GCAGGCGCTG GCCAGCATGG GCGCGGCCGT GCCCGCCCTG
TACAAACAGT ATGGCGAGCT GTGCGACGGT TTAGGGGTTA GCTTCCTCGA CTTCGGCATA
GACGCCGAGT TTGGCGACTG CATCGACGGC CTGGTACTGG TGGACACCCA CAAACTCAAG
GCCAAGAAGC GTGCCCGTTA CATAGACTGC CACCTGCCCG AACTCAACAC GGGCGGCGAA
GACTGCCCGT TGAAATAG
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| Protein sequence | MDRVSPSRAP SLTQRADPMQ KMIFTVDDVV ANNLPKLNQS PWLATPTKAL LRYFLMEKEC
HAITQEFDYL EGVDFIEQVL ASFNFTYSMP STEVENIPSE GRVVIYANHP IGSLDALAMI
KLISKVRPDI KVVANELLMA LEPLHSILLP VRNMTGGTPK QHLEKIHQHL KSEGAVLIFP
SGEVSRLRPN GVRDLHWHSG FLKIAKACQA PLLPMFADAK NSATFYGASM IYKPLASLLL
VKEMFKQAKR TMPLRIGQLI PKEVVASSDF PLKTQVKLLK NHLYRIGKNR SPLFKTQNAI
AHPESRSDLI EALSQCELLG QTHDEKLIYL YRHKQSNPIM REIGRLREIA FRAVGEGSGK
RRDTDKYDAD YLHLVLWDHK ALEIVGAYRF ASAKSLYQDE HKGLYSQSLF QYRDEFAPYF
EQGLELGRSF VQPKYWGKRS LDYLWFGIGA FLAKHPEYRY LFGPVSISDA LPEQAKAMLV
YFYQTHFCPV QELAHANSRY SFTPEQHEQL DSLFPGEDYQ AEFKLLKQAL ASMGAAVPAL
YKQYGELCDG LGVSFLDFGI DAEFGDCIDG LVLVDTHKLK AKKRARYIDC HLPELNTGGE
DCPLK
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