| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2788 |
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| Symbol | |
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| ID | 4922722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3297692 |
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| End bp | 3298537 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164383 |
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| Product | peptidase U32 |
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| Protein accession | YP_001094913 |
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| Protein GI | 127513716 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT CATTAGGACC GATTCAATAT TGCTGGCCCA AAGAGAAGGT GGTCGAATTT
TATGAGGCCG TGGCTCAGAG CAGCGTGCCC CTGGTCTATC TGGGCGAGAC CGTCTGTAGC
CGCCGCCGCG AGCTTAAGTT CAGCGACTAT CTCGCTTTAG CCCAGATGCT GAAGGCCGCA
GGCAAGGAGG TGGTGCTCTC CACCCTGACG CTTATCGAGG CGCAGTCGGA ATTCCTTGAA
CTCAAGAAGC AGGTAGAAAA TGGCGAGTTC ACCATAGAGG CTAACGATGT CGGCGCCATC
TATCTGGCCA AGGAGCATGG GATCCCCTTC GTCTGTGGGC CCAGCATCAA CAGCTATAAC
GCCGCGACCC TGAAGAAGTT TGCCAGTTGG GGCATGCAAC GTTTCGTGAT GCCGCTGGAG
CTGTCCAAGG CCTGGCTCAC CCAGGTGCTT GATGATCTCG CCCCGCGCCA GGTCGAGGTA
GAAGTGTTCG GTCATGGCTT CATGCCGCTG GCCCATTCGG CCCGCTGCTT CACCGCCCGC
CACAAGGGGC TCACCAAGGA TAAGTGTCAG ACCATCTGTA TCGAAAATCC CGAGGGCTTA
CTGGTGCAGA CTCAGGAAGA CCAGCCGCTG CTGCGCCTCA ACGGCATACA GACACAGTCG
GCCAATTATA TGGATCTCTG TGACCAGCAG ACTCAGATGC AGGCCTTGGG GGTCGACTAT
TTCCGTATCT CGCCCTCGTC CCTGGCATCC ATCGCCTTGG CCGATAAGTT GCCGGCCAAA
TCGGCCAGCC ACGACAGACA GTGCAACGGC TACTGGCATC AGCTGCCGGG TCTGGCCCTA
AGCTAG
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| Protein sequence | MKTSLGPIQY CWPKEKVVEF YEAVAQSSVP LVYLGETVCS RRRELKFSDY LALAQMLKAA
GKEVVLSTLT LIEAQSEFLE LKKQVENGEF TIEANDVGAI YLAKEHGIPF VCGPSINSYN
AATLKKFASW GMQRFVMPLE LSKAWLTQVL DDLAPRQVEV EVFGHGFMPL AHSARCFTAR
HKGLTKDKCQ TICIENPEGL LVQTQEDQPL LRLNGIQTQS ANYMDLCDQQ TQMQALGVDY
FRISPSSLAS IALADKLPAK SASHDRQCNG YWHQLPGLAL S
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