| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2783 |
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| Symbol | |
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| ID | 4922717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3292157 |
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| End bp | 3293518 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164378 |
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| Product | peptidase U32 |
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| Protein accession | YP_001094908 |
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| Protein GI | 127513711 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.582751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTTA AACCTGAGCT GCTGTCTCCT GCCGGGACCC TAAAAAATAT GCGTTATGCC
TTCGCATATG GCGCCGATGC GGTTTACGCT GGCCAACCGA GATATAGCCT GCGTGTCAGA
AACAACGATT TCAAGATGGA AAACCTCGCG ACGGGTATCC AAGAGGCCCA CAGCCTGGGT
AAGAAACTCT ATGTGGTGAG CAACATTGCC CCCCACAACA CTAAGCTCAA GACCTATATC
AAGGATATGG AGCCTGTGGT GGCCATGCAG CCCGATGCGC TGATCATGTC AGACCCCGGT
CTTATCATGA TGGTGCGCGA AGCCTTCCCG GATCAGACGG TGCATTTGTC TGTTCAGGCC
AATGCCATCA ACTGGGCCTC GGTCAAGTTC TGGCAGCAAC AAGGGATCAA GCGTGTGATC
CTCTCTCGCG AGCTGTCGCT GGATGAGATC GAAGAGATAC GTCAACGCTG CCCAGACATA
GAGCTTGAGG TCTTCGTACA CGGCGCCCTG TGTATGGCTT ATTCAGGCCG CTGCCTGCTC
TCTGGCTATA TCAACAAGCG TGACCCTAAC CAGGGTACCT GCACCAACGC CTGCCGCTGG
AAGTACGACG CCCACGAGGC GGTGCAGACA GAGACCGGCG ACATAGTGGC GGTTAACCCC
GAGGTGCAGA TGCACAACCC TACCCTAGGC GAAGGCGCGC CAAGCAGCGA GGTCGTCTTG
CTACAAGAGG CGGGACGTCC GGGCGAATAT ATGCCAGCCT TCGAAGATGA GCATGGCACC
TATATCATGA ACTCCAAGGA TCTACGCGCC ATCCAGCACG TCGAGCGTCT GACCAAGATG
GGTGTAGATT CGCTGAAAAT CGAAGGCCGT ACCAAGTCCT TCTACTATGT GGCCCGTACC
GCACAGCTCT ATCGCCAGGC GATCGAAGAT GCCGCAGCCG GGCGCGAGTT TAACCCTGCG
CTCATGTATC AGCTCGAAGG GCTGGCGCAC CGTGGTTACA CCGAGGGCTT CCTGCGTCGT
CACGTGCACG ACGAGTACCA GAACTATGAC TACGGCTACT CTATCAGCGA TACCCAGCAG
TTTGTCGGCG AGTTTACCGG CAAGCGCAAC GCCAAGGGGA TGGCCGAGAT CGACGTGAAG
AACAAGTTCT CCGTCGGCGA CAGCGTCGAA CTGATGACGC CCCAGGGCAA CATCAACCTG
ACCATAGAAC ACCTGGAAAA CCGCAAGGGC GAGAGCGTCG AGGCGGGACT AGGTTCGGGT
CACTTCGTCT ATCTGCCGGT ACCGGCCGAA GTCGAGGTCG AGCGTGCCAT CCTGATGCGC
AACCTGACGG GCGAGCAGAG CACACGTCAG CCACACCCTT AA
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| Protein sequence | MMFKPELLSP AGTLKNMRYA FAYGADAVYA GQPRYSLRVR NNDFKMENLA TGIQEAHSLG
KKLYVVSNIA PHNTKLKTYI KDMEPVVAMQ PDALIMSDPG LIMMVREAFP DQTVHLSVQA
NAINWASVKF WQQQGIKRVI LSRELSLDEI EEIRQRCPDI ELEVFVHGAL CMAYSGRCLL
SGYINKRDPN QGTCTNACRW KYDAHEAVQT ETGDIVAVNP EVQMHNPTLG EGAPSSEVVL
LQEAGRPGEY MPAFEDEHGT YIMNSKDLRA IQHVERLTKM GVDSLKIEGR TKSFYYVART
AQLYRQAIED AAAGREFNPA LMYQLEGLAH RGYTEGFLRR HVHDEYQNYD YGYSISDTQQ
FVGEFTGKRN AKGMAEIDVK NKFSVGDSVE LMTPQGNINL TIEHLENRKG ESVEAGLGSG
HFVYLPVPAE VEVERAILMR NLTGEQSTRQ PHP
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