| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2782 |
|---|
| Symbol | |
|---|
| ID | 4922746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3291026 |
|---|
| End bp | 3291868 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640164377 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_001094907 |
|---|
| Protein GI | 127513710 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGCG AGCATCAACT ACTGGTTGGG TTATTGAAAA AGTTAAAGGC AGATGCTTTG
GTCTTGCCGA CTTTGCCCGA GGTAGCAATG CGCGTTCAGG AGGTGGTTTC CCGCCCCGAC
TCCAGCCCTA AGCAGGTGGC CGAAATTATC GGTCAGGATG CCGCCATCTC GGCCCGTATG
ATCAAGGTGG CCAACAGCGC CATGTATAGC CGCGGCATCA AGGCGGAAAA CATCAATGCT
GCGGTGACCC GCATCGGCCT GACGCAGATC AAGGCGATCG CCACCTCAGT GGCCATGGAG
CAGCTGTTCA TCTCCACCAA CGAGATGGTG TGGGAGGTGA TGGACGAGGT GTGGCGTGCC
TCTATCGAGG TGACCTCGGC GGCCTGCGCC CTGCTACTCA AGTATTCCAA GACCCACAAG
GGCTGTGGAC TCAACTACGA CACCCTGACC CTGGCGAGCC TGGTGCACAA TATCGGCGCC
TTGCCGGTAC TGACCGAGGC CGAGGCCAAT CCTCATCTGT TTACCAGCAT AGAGCAACTC
AGGGCGCTGG TGAGGAAGAT GCAGGGGCCG CTAGGTCGCG CCGTGCTGAA GAGTTGGGAC
TTCTCGCCCG AGGTAACAGA GGTGGTCGAG CGCTGGGCGG ATCTGCCCTA TCTGCCAGAG
CAGGTGACCT ATCTGGATTT CGTGCGCGCG GCCGCCTTCT ATACCGGCGA ACTGCGCGCC
GGTCACGATC TGGAGGAGCG TTTGGACGTG TTCCTTCAAC GCGGATTGCC CGTGAGCCCG
GAATATCTGG GATCGGATGA ATTTCTCGAT AACTACCATT CGATTAAATT AAGTTATGAA
TAG
|
|---|
| Protein sequence | MSSEHQLLVG LLKKLKADAL VLPTLPEVAM RVQEVVSRPD SSPKQVAEII GQDAAISARM
IKVANSAMYS RGIKAENINA AVTRIGLTQI KAIATSVAME QLFISTNEMV WEVMDEVWRA
SIEVTSAACA LLLKYSKTHK GCGLNYDTLT LASLVHNIGA LPVLTEAEAN PHLFTSIEQL
RALVRKMQGP LGRAVLKSWD FSPEVTEVVE RWADLPYLPE QVTYLDFVRA AAFYTGELRA
GHDLEERLDV FLQRGLPVSP EYLGSDEFLD NYHSIKLSYE
|
|---|
| |