| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2780 |
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| Symbol | |
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| ID | 4922744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3288994 |
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| End bp | 3289434 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164375 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001094905 |
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| Protein GI | 127513708 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCAG ACGATAAGTT CAGCCCTACC TTTCATTTTC CGGTGCAGAT CTACTACGAA
GATACCGACT TTTCCGGCGT GGTGTACCAC CCTAACTTCT TGAAATATTT CGAGCGTGCC
CGTGAGCATG TGATCGGCGC CGAGCGACTG GCAGCCCTCT GGCAGCAGCA CGGCCTGGGT
TTTGCCGTCT ATCGCAGCGA CATGCTCTGC CATGAAGGGG TTGAATTTGC CGACGTGGTG
GATGTGCGTA CCCGCTTCTA TTTCGAGAGT AAGTATCGCA CCGTATGGCA GCAGGAGATC
TGGCGCCCCA AGGGCACCAA GCCGGCGGTG ACCGCCCATA TCGAGATGGT ATGCATGAAC
AAGGCGAGAC AGCTCTGCCC CATGACGCCG CCCCTCATCG AGGAGCTCGG CCGTCACTTC
GACCAAGCCA TCAGCCTGTA A
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| Protein sequence | MKPDDKFSPT FHFPVQIYYE DTDFSGVVYH PNFLKYFERA REHVIGAERL AALWQQHGLG
FAVYRSDMLC HEGVEFADVV DVRTRFYFES KYRTVWQQEI WRPKGTKPAV TAHIEMVCMN
KARQLCPMTP PLIEELGRHF DQAISL
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