| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2779 |
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| Symbol | |
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| ID | 4922743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3288098 |
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| End bp | 3288907 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164374 |
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| Product | amino acid ABC transporter |
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| Protein accession | YP_001094904 |
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| Protein GI | 127513707 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCACC CCAGCTTATC TCGGCAAATC AATCACCTCA TCTCTGGCCT GACACTCATG
CTGGCGCTTT TTAGCCTCAC CGCCACCGGC CAGGAGCTGA ATATGGCCTC GGCCGACAGC
CCGTCGGCGC CGCTCAAGGT CAAGCTAGCC GCCGAAGATA ACTGGGCGCC TTTTGCCGAT
CCCTATGGCA AGGGGCTCTC CCATCGTCTG GTCAAGCAGG CGTTTTCCCG GGTCAATGTC
GATGTCGACA GTCTGGTGGT CTCCTACGCC CGTGGCGTGG TGATGACTAA GCAAGGCATA
GTAGATGGTG TCTTTAATCT GCACAAAGAG CGCAAGACCC AGGAGGAGTT TGTCTTCGGC
CAGATCCCCC TGTTCACCAC CTCGGCCTCC TTCTATCAGA ATAATGCCCA TCCGCTGCAG
GCAGAGGACA AATGGCACCT GCCCCAGGGG TTACTTGTCG GCATCATCAA GGGCTATGAA
TATGGCGATG AGCTGTCACA GCTTAAACAG CTCAGACTAG TCGAGGTGGA CAATCACAAT
CAGCTGATCA ACCTGTTGCT GCTCAACCGC ATCGATGCCG CCATCATGTA CGACGAGGTA
GCCAATCAGT ATCTTGGTCA GATGGGGGTC GGCAAGGTGA TTAGCCGCAG CGTGCACAAT
CATACCGGCG ACCTCTATGT GGCCTTCTCC AAGCAGCGTC CCAACGCCCA GCTATTTGCC
GACAAGCTAG ATCTCGGCCT CAAGGCCCTT AAGCAAGACG GCAGCTATCA GAGCATAATG
AACAGCCTAC AGGCGATCGC CAGCAAATAG
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| Protein sequence | MLHPSLSRQI NHLISGLTLM LALFSLTATG QELNMASADS PSAPLKVKLA AEDNWAPFAD
PYGKGLSHRL VKQAFSRVNV DVDSLVVSYA RGVVMTKQGI VDGVFNLHKE RKTQEEFVFG
QIPLFTTSAS FYQNNAHPLQ AEDKWHLPQG LLVGIIKGYE YGDELSQLKQ LRLVEVDNHN
QLINLLLLNR IDAAIMYDEV ANQYLGQMGV GKVISRSVHN HTGDLYVAFS KQRPNAQLFA
DKLDLGLKAL KQDGSYQSIM NSLQAIASK
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