| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2777 |
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| Symbol | |
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| ID | 4922741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3283298 |
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| End bp | 3284653 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164372 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001094902 |
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| Protein GI | 127513705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG ATGCCCTCCC GTTAGACCCC TTACTGGCCC AGGCGGCTAA GGCCTGCGGC
TACGAGACCC TGACCCAGGT TCAGGCCAAG GTGATCCCCA CGGCGCTGGC CGGGCGGGAT
CTGATGGCCT GCGCCCAGAC CGGAACCGGT AAGACGGCGG CCTTTAGCTT TGTGTTGTTG
CAGCGCCTGC TCAATCAGCC AAGAGCAATT GGGCAGCTCA GCGCCCTGAT CCTGACTCCA
ACGAGAGAGC TGGCGATCCA GGTGGCAGAC AGCATCAGTC GCTACAGCCA GTTCACCGAG
CTGACCACTC TGGCCGTCTA TGGCGGCGCC AACATCAATC CCCAACGCAA GGCCTTGGCG
AGAGGTGTCG ATATCCTGGT GGCCACGCCG GGGAGGCTAT TCGATCTCTT GGGCCAACAT
GATTTGAGCC TGGAGACGGT AGATCAGCTC ATTGTCGATG AGGCGGATCG CATGCTCGAC
ATGGGGTTCG TGAGAGATAT TGAGCGCACC AAGCGGCTCT TGTGCGTGTC TCACTCGACC
ATGTTGTTCT CGGCCACCTT CACCCCAGAG GTGAAGGCAT TGGCCACTAA GATGCTGGAT
AACCCTGAGT GGATCAATGT GACCAGCGCT AGTAGCGGGC CGCAGATCGA GCAGAAGATC
TATCCCTTAG ATGCAAGGCG TAAGGCGGAG CTGCTGGCCG AGCTTATCGG CCGCAACAAC
TGGCAACAGG TGCTGGTGTT CGTCAACACC AAGGAGAGCG CCGAGCGCCT GCACCGCGAG
TTAAAGCTCG ATGGCATCAA GAATGCGGTG TTTCACGGGG ATAAGACCCA GGGCGCGCGC
AACCGGGCGC TGGAGCAGTT TAAGGCCGGC GAGCTGCGGG TGCTGGTGGC AACAGATGTG
GCCGCCCGCG GCCTGGATAT CACAGCGCTG CCCTTAGTGA TCAACCTAGA ATTGCCCGAT
GAGCCTCAGG ACTATGTGCA CCGTATCGGT CGTACCGGCC GCGCCGGTCT TAGCGGGGTT
AGCATCTCCT TCGTCGCCAA GCAGGATGAA ACCGCACTTG GCGCGATCGA GGCTCTTATC
GGCAAGACCT TGCCACGTGA GGTACAGCCC GGATATGAGA TGGGGGCGCC GCTACCGGCC
AGGTATCGCG AGCTCGACAC CAGAGTGACC TCTAAGGCGG CCCAGCCTAA GCGGGGCAAG
GGACAGAAGT TCGGCAGCCA GGACGGCAGA AGGGGACAGA GTCGCGCTAA GGCTCCCCAG
CGAAAGGCGC CCCAGCGCAA GACTAGTAGC GACAAGGCTA GTAATGACAA GGCGAGACGC
CCATCAAGTG ATAAGGGCTT CAGGGGCAAG CGCTAG
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| Protein sequence | MNFDALPLDP LLAQAAKACG YETLTQVQAK VIPTALAGRD LMACAQTGTG KTAAFSFVLL
QRLLNQPRAI GQLSALILTP TRELAIQVAD SISRYSQFTE LTTLAVYGGA NINPQRKALA
RGVDILVATP GRLFDLLGQH DLSLETVDQL IVDEADRMLD MGFVRDIERT KRLLCVSHST
MLFSATFTPE VKALATKMLD NPEWINVTSA SSGPQIEQKI YPLDARRKAE LLAELIGRNN
WQQVLVFVNT KESAERLHRE LKLDGIKNAV FHGDKTQGAR NRALEQFKAG ELRVLVATDV
AARGLDITAL PLVINLELPD EPQDYVHRIG RTGRAGLSGV SISFVAKQDE TALGAIEALI
GKTLPREVQP GYEMGAPLPA RYRELDTRVT SKAAQPKRGK GQKFGSQDGR RGQSRAKAPQ
RKAPQRKTSS DKASNDKARR PSSDKGFRGK R
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