| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2774 |
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| Symbol | |
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| ID | 4922738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3279362 |
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| End bp | 3280426 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164369 |
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| Product | TonB family protein |
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| Protein accession | YP_001094899 |
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| Protein GI | 127513702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0960618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT CATTATCAGG CCTCGCCCTG GTGTTGTGCG CGCACTTCGC TGCGCCTCTA
AGTTTCGCCT CGCCCTTTAG CGAAAGCTAC GCCGCCTATC AGCAGGCGCT GGCCGGGCAA
GATAAAGCCC AGGTGGCGCT TACCGCTGCC AAGGCCTACG AACTCGGCCA GGGCTATTTC
GAATCAGACA GTATCGATCT GGTTAATCTC GAGCTTAATT TGGCCACTGC GCTGCAAGAT
AGTGGCGAGA CTCAGGCCGC CCACGAGCAT TTCAACAATG TTATTCAGGT CTATCGAAAA
CATTTTGGCC GCGATGCCAT AGAGCTTGTC GATCCCTTGA TTGGCGCCGC CCAGACCATG
GCCGCCTCGA GAGAGAAGGT GGATCTGTTC AAGCAGGCGA TCGCCATCGC CGAGGACGCC
GACAAGCCGC TGCTGCTGGC CGAGGTGAAG ATGTTGACTT TCCATGGTCT GGCATCGACC
CATTTCTATA CCCGGGAGAT ACGTGACGAG GCGCTGGAAG CCTATGAGAT CTATCGTCAA
GAGATGCCGG CCGATGCCAT GGCAAGGCTC AAAGCCACCT ACTATGTTGG CATGATCAAG
GCGGCGGAGA AGAAGTATGA CAAGGCGGTC CCTCTGCTCG AAGAGGTGAT CAAGCAGTTC
TCCGTGCTCG ACTTTAGCCA TCCCTACAAA CTGGCCGCCC ATGCGCGTCT GGTGGAGATC
TATGAGGCCG AAGGCGAGAG CGACAAGTCG ACCCAGCATT GTGTGGCGAT CGGCAGCATG
AAGCCCTGGT CTGACGAACA GGAGCAGGCG CCCCTCTACC GGGAAGCGCC AAAGTATCCT
ATCTCCTATG CCAGAGATCG CCGGGAAGGC TGGACCCAGA TGTCCTTTAC CGTGGATGAG
CAGGGGTTTG TGCGTGACCC TGTGGTGCTG GCCTCTGAAG GGGGGCAGCA GTTCACCCGC
GAGTCGCTAA AGGCCATCAA GCGCTGGCGC TACGCCCCTA AGTTTGTCGA TGGTAAACCC
GTACCTGCCG AGGTGAGCGT GCAGCTCGAG TACAAGGTCA ACTAA
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| Protein sequence | MKKSLSGLAL VLCAHFAAPL SFASPFSESY AAYQQALAGQ DKAQVALTAA KAYELGQGYF
ESDSIDLVNL ELNLATALQD SGETQAAHEH FNNVIQVYRK HFGRDAIELV DPLIGAAQTM
AASREKVDLF KQAIAIAEDA DKPLLLAEVK MLTFHGLAST HFYTREIRDE ALEAYEIYRQ
EMPADAMARL KATYYVGMIK AAEKKYDKAV PLLEEVIKQF SVLDFSHPYK LAAHARLVEI
YEAEGESDKS TQHCVAIGSM KPWSDEQEQA PLYREAPKYP ISYARDRREG WTQMSFTVDE
QGFVRDPVVL ASEGGQQFTR ESLKAIKRWR YAPKFVDGKP VPAEVSVQLE YKVN
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