| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2770 |
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| Symbol | |
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| ID | 4922734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3274862 |
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| End bp | 3275743 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164365 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001094895 |
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| Protein GI | 127513698 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.409346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAAATG AAGCGATAAC GCGATACCAG CAGCGCGTCG ACGGCCAGCT GCGCCATTTT
ATCAATGCAC AAGACGATAC CGAGCCACAA CTCAAGGCCG CCATGGAACA CGGCGCCCTG
ATTGGCGGCA AACGTATCCG CCCCTTTCTG GTCTACGCCG TGGGCGAGAT GCTGGGTGTA
CCACTGGAAA GGCTAGATGC CTGCGCTGCC GCCATCGAAT GTATTCATGC CTACTCGCTG
ATCCACGACG ATCTCCCGGC CATGGACGAT GACGCCCTGC GCCGTGGCCA GCCGACAGTG
CATATCGCCT TTAATGAGGC CACCGCCATC CTGGCCGGCG ATGCCCTGCA AACCTTGGCC
TTCGAGATCA TCAGCCAGGA AGGCGGCGAG CTGAGTGCCA GCCAACAACT GGCCATGGTG
CGCGCCCTCG CCAAGGCGTC TGGCTACAGC GGCATGTGTG GTGGTCAGGC GATGGATCTT
AACGCCACCG ACAGACAGAT AGATCTCGAG ACCCTAAAGC GGTTACACAG ATTAAAAACC
GGCGCCTTGA TTCGCTGTGC AGTAGAATTA CCTATCATTG CTGCCAAGGT CACAGATGAG
CAAGCGAGCC ATCTGTTAAC ATTTGCCGAC GCCATCGGCC TCGCCTTCCA GGTACAAGAC
GACGTGCTGG ACATCATCGC CAGCACAGAA GAGCTGGGTA AGCCCCAGGG CTCGGACTGC
GAATCGAACA AGAGTACCTA TCCGAAACTA CTCGGTTTAT CCGGGGCCCA AGCGACTGCG
AAAAGTTTGA TCGAAGACGC CCTATCAGCG CTGGCTAAAT TACCATACAA TAGCCAGTTA
ATTGCCGAAT TCGCCCGTTT CATCATAGAG CGAAGAGTAT AA
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| Protein sequence | MLNEAITRYQ QRVDGQLRHF INAQDDTEPQ LKAAMEHGAL IGGKRIRPFL VYAVGEMLGV
PLERLDACAA AIECIHAYSL IHDDLPAMDD DALRRGQPTV HIAFNEATAI LAGDALQTLA
FEIISQEGGE LSASQQLAMV RALAKASGYS GMCGGQAMDL NATDRQIDLE TLKRLHRLKT
GALIRCAVEL PIIAAKVTDE QASHLLTFAD AIGLAFQVQD DVLDIIASTE ELGKPQGSDC
ESNKSTYPKL LGLSGAQATA KSLIEDALSA LAKLPYNSQL IAEFARFIIE RRV
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