Gene Shew_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2762 
Symbol 
ID4922757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3267937 
End bp3268326 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content56% 
IMG OID640164357 
Producthypothetical protein 
Protein accessionYP_001094887 
Protein GI127513690 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.340098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.38705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAG GGTTTTTATT GCTGGCAGCC TTGAGTGGTT TTTTAGCCGT GGCCCTGGGA 
GCCTTCGGCG CCCATGGACT CAAGCAGGTG ACTACGCCAG AGATGATCGA CATCTTTAAT
CTAGGGGTCG AGTATCAGTT CTACCACACC TTTGCACTGA TCGCCGTGGC CTTTAGCGGT
CACTGGTTCA AGTCGCGCCT TATCGACTGG GCGGGCTACC TGTTTCTGCT TGGCATAGTG
ATGTTTTCCG GTTCACTCTA CCTCTACGTG TTGGTGGGGA GCAAGTGGAC AGGCCCTGTG
ACGCCTATGG GCGGCGTCTG CTTCCTGCTG GGATGGTTGT TCATCGCGGT GGCCGTGTGG
CGTAATCGCG TGGTGGAGCT GGACGATTAA
 
Protein sequence
MRKGFLLLAA LSGFLAVALG AFGAHGLKQV TTPEMIDIFN LGVEYQFYHT FALIAVAFSG 
HWFKSRLIDW AGYLFLLGIV MFSGSLYLYV LVGSKWTGPV TPMGGVCFLL GWLFIAVAVW
RNRVVELDD