Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2762 |
Symbol | |
ID | 4922757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3267937 |
End bp | 3268326 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640164357 |
Product | hypothetical protein |
Protein accession | YP_001094887 |
Protein GI | 127513690 |
COG category | [S] Function unknown |
COG ID | [COG2363] Uncharacterized small membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.340098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.38705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAG GGTTTTTATT GCTGGCAGCC TTGAGTGGTT TTTTAGCCGT GGCCCTGGGA GCCTTCGGCG CCCATGGACT CAAGCAGGTG ACTACGCCAG AGATGATCGA CATCTTTAAT CTAGGGGTCG AGTATCAGTT CTACCACACC TTTGCACTGA TCGCCGTGGC CTTTAGCGGT CACTGGTTCA AGTCGCGCCT TATCGACTGG GCGGGCTACC TGTTTCTGCT TGGCATAGTG ATGTTTTCCG GTTCACTCTA CCTCTACGTG TTGGTGGGGA GCAAGTGGAC AGGCCCTGTG ACGCCTATGG GCGGCGTCTG CTTCCTGCTG GGATGGTTGT TCATCGCGGT GGCCGTGTGG CGTAATCGCG TGGTGGAGCT GGACGATTAA
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Protein sequence | MRKGFLLLAA LSGFLAVALG AFGAHGLKQV TTPEMIDIFN LGVEYQFYHT FALIAVAFSG HWFKSRLIDW AGYLFLLGIV MFSGSLYLYV LVGSKWTGPV TPMGGVCFLL GWLFIAVAVW RNRVVELDD
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