| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2748 |
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| Symbol | |
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| ID | 4922915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3248436 |
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| End bp | 3249728 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164343 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001094873 |
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| Protein GI | 127513676 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000859237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000414607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTTGATT CATATTCAGG GTATCAACTA CTCACTCGAT TAGTGATATA TCTACTGCTC
TGTCTTGCCG TTGGATTACT CATAAATCAG GTGCTGTGGA TCATGTTGCT GGGCAGTATC
GCCCTGCTCA TTTGGCACTA TAAACAGATC TCAAGACTCA ACTATTGGCT GTGGCGCGAT
AAGCGACTGA CGCCACCCAA CGGCAGTGGC AGTTGGGAAG GGGTGTTCAA CGGTATCTAC
CGTTTGCAGG GGAAAAACCG TAAACGTGTC AGCCAGCTCG CCTATCTTCT CGCCCGCTTC
AGACAAGGGG CCGAGGCGCT ACCCGATGCG GCCGTGGTGC TCGATTCAGA GAACAACATC
GCCTGGTGTA ACAAGCTTGC CCAGCTCATG TTAGGCCTGG TGTGGCCCCA GGATAACGGT
CAGCGGATCG ACAACCTTAT CCGTCACCCC GACTTCTCCA AATACCTCAA GCAGGCCGAT
TTCGACGAGC CGTTCGAACT TATCGACACC CAGAGTGATA GCCGTATCTT AGAGATTCGT
ATCATGGGCT ATGGTTCGGG GCAGCGGTTA TTGATTGCCC GCGACATCAC ACGTATTCGC
CAGCTTGAGG GGATGCGTAA GGAGTTTGTG GCCAACGTTT CTCACGAGCT CAAGACGCCG
CTGACAGTAT TGCAGGGTTA CCTGGAGATG ATGCAGGGGA TGGCCGAGCC AGACTCGCCC
AATGCCAAGG CGATGTCGCA GATGCAGCAG CAGACCAACC GTATGCGTTC CATGGTCGAG
CAGCTGCTGG TGCTGTCGCG CATCGAAGAT GGTAGCGCGG TAAACCTTGA GACCAAGGTG
AACATGACAG TGCTCATGGA GACTCTCAAA GAGGAGGCGC AGGCGCTGGC CTTGGGGCAG
TATGAACTGT CTATCGAGGC GGATCCCGGC CTGAATCTTT ATGGCAGCGA GGTGCAGCTT
CGTAGTGCCT GCTCTAACCT GGTGTCGAAC GCCATTCGTT ATACCGAGCC CGGCGGTAAG
ATCAGCATTC GCTGGAAACG TGTGCCTATG GGGGCCGAGT TTAGCGTGAC CGATACCGGC
GAGGGTATAG CGCCGCAGCA TCTTACCCGT CTAACCGAGC GCTTCTACAG GGTCGATAGC
GCCCGCTCGC GCCAGAGTGG CGGCTCGGGA TTGGGCCTGG CCATCACCAA ACACGCTTTG
CATCATCACC AGAGCGATCT CACCATTGAG AGTAAGCTAG GGGTAGGTAG CCGCTTTAGC
TTCATCATCC CTAATCATCT GCTCGACCTT TAG
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| Protein sequence | MFDSYSGYQL LTRLVIYLLL CLAVGLLINQ VLWIMLLGSI ALLIWHYKQI SRLNYWLWRD
KRLTPPNGSG SWEGVFNGIY RLQGKNRKRV SQLAYLLARF RQGAEALPDA AVVLDSENNI
AWCNKLAQLM LGLVWPQDNG QRIDNLIRHP DFSKYLKQAD FDEPFELIDT QSDSRILEIR
IMGYGSGQRL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQGMAEPDSP
NAKAMSQMQQ QTNRMRSMVE QLLVLSRIED GSAVNLETKV NMTVLMETLK EEAQALALGQ
YELSIEADPG LNLYGSEVQL RSACSNLVSN AIRYTEPGGK ISIRWKRVPM GAEFSVTDTG
EGIAPQHLTR LTERFYRVDS ARSRQSGGSG LGLAITKHAL HHHQSDLTIE SKLGVGSRFS
FIIPNHLLDL
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