Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2745 |
Symbol | |
ID | 4922912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3244646 |
End bp | 3245404 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640164340 |
Product | hypothetical protein |
Protein accession | YP_001094870 |
Protein GI | 127513673 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00183256 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000580838 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGAAA TAGATAAAAG AATCGAGAAT CTATACAATT TTTTAGGTTT GCTTGATGAG TGGACGGAGA CACGTTCCAG CGAAGCCCGG TCAGCAATAA ATCGAGCAAA AAGAGGTGTT CAAAGAGAGG TCATTGAGGC TGGATGTTTA CATACTATGA CGATCTCTCC TCCCCCTGCA GTGGGAGGGT TGGTTATGCA GAATGTTAAC CCCTTCGACA TGATTTTCGA TAAAGTCTAC CTTCGTAGTC TAAATCCGTA TGTGCGGGAT ATGATTAACC AAACTATTGG TGTCCTAGAA GACAGAAAAA ACAATCCGCA GGAAAATTTG CTCGATAGAA ACGAGGCGCA GATGAAATTT CAAATCCAGC AAGGCTATGT GTTTGTGGCT ATGCCTATCG GACCGGCAAA TCCTTTCGAT GATGTACTCG ATGCTATAAA AGAAACTTGC CAGAAATGTG GGTTGAATGC AGAGAGGGTC GACGAGGCAC AAGCGAATGA GCGAATCACA GATCGAATTC TTGAGTCCAT TCAGAAAGCA GAATATGTAA TTGTCGATCT AACTGAGTCT AGGCCGAATG TATTTTATGA AGCAGGTTAT GCGCAAGGTA TAGGAAAGCT ACCAATTTAT ATTGCCAGAA AAGGAACCAA TCTAGAGTTC GATCTTAAAG ACTATCCAGT GATATTTTTC GATAGTTATA GAGATCTAAA AAGTGGGTTG GAAGCTAGGT TCAGAGGTTT AGCAGAGGCA AATGTTTAA
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Protein sequence | MEEIDKRIEN LYNFLGLLDE WTETRSSEAR SAINRAKRGV QREVIEAGCL HTMTISPPPA VGGLVMQNVN PFDMIFDKVY LRSLNPYVRD MINQTIGVLE DRKNNPQENL LDRNEAQMKF QIQQGYVFVA MPIGPANPFD DVLDAIKETC QKCGLNAERV DEAQANERIT DRILESIQKA EYVIVDLTES RPNVFYEAGY AQGIGKLPIY IARKGTNLEF DLKDYPVIFF DSYRDLKSGL EARFRGLAEA NV
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