Gene Shew_2745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2745 
Symbol 
ID4922912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3244646 
End bp3245404 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content41% 
IMG OID640164340 
Producthypothetical protein 
Protein accessionYP_001094870 
Protein GI127513673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00183256 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000580838 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGAAA TAGATAAAAG AATCGAGAAT CTATACAATT TTTTAGGTTT GCTTGATGAG 
TGGACGGAGA CACGTTCCAG CGAAGCCCGG TCAGCAATAA ATCGAGCAAA AAGAGGTGTT
CAAAGAGAGG TCATTGAGGC TGGATGTTTA CATACTATGA CGATCTCTCC TCCCCCTGCA
GTGGGAGGGT TGGTTATGCA GAATGTTAAC CCCTTCGACA TGATTTTCGA TAAAGTCTAC
CTTCGTAGTC TAAATCCGTA TGTGCGGGAT ATGATTAACC AAACTATTGG TGTCCTAGAA
GACAGAAAAA ACAATCCGCA GGAAAATTTG CTCGATAGAA ACGAGGCGCA GATGAAATTT
CAAATCCAGC AAGGCTATGT GTTTGTGGCT ATGCCTATCG GACCGGCAAA TCCTTTCGAT
GATGTACTCG ATGCTATAAA AGAAACTTGC CAGAAATGTG GGTTGAATGC AGAGAGGGTC
GACGAGGCAC AAGCGAATGA GCGAATCACA GATCGAATTC TTGAGTCCAT TCAGAAAGCA
GAATATGTAA TTGTCGATCT AACTGAGTCT AGGCCGAATG TATTTTATGA AGCAGGTTAT
GCGCAAGGTA TAGGAAAGCT ACCAATTTAT ATTGCCAGAA AAGGAACCAA TCTAGAGTTC
GATCTTAAAG ACTATCCAGT GATATTTTTC GATAGTTATA GAGATCTAAA AAGTGGGTTG
GAAGCTAGGT TCAGAGGTTT AGCAGAGGCA AATGTTTAA
 
Protein sequence
MEEIDKRIEN LYNFLGLLDE WTETRSSEAR SAINRAKRGV QREVIEAGCL HTMTISPPPA 
VGGLVMQNVN PFDMIFDKVY LRSLNPYVRD MINQTIGVLE DRKNNPQENL LDRNEAQMKF
QIQQGYVFVA MPIGPANPFD DVLDAIKETC QKCGLNAERV DEAQANERIT DRILESIQKA
EYVIVDLTES RPNVFYEAGY AQGIGKLPIY IARKGTNLEF DLKDYPVIFF DSYRDLKSGL
EARFRGLAEA NV