| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2729 |
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| Symbol | |
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| ID | 4922925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3228287 |
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| End bp | 3228877 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164324 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001094854 |
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| Protein GI | 127513657 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000621665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAGAA GTTGTAATTT TGATAGGCAG GAGAAGCTGG TAGAGGCGAT GGAGCTCTTC
TGGCAGAAAG GCTATGCCGA CACCTCGGTG GCGGATCTGG TGGATCACCT TAAGATTAAC
CGCTTTAGTC TGTATAACAG CTTCGGTGAC AAGCTGAGCC TGTATCGTGA GGCGCTGGCC
TACTACTTCG ATAACCATGC TATGCCCAAT CTCACGCCCC TGTTTGCCGA GACGGCTGGC
TTAGATGAGT TGGTGACTTA TCTGGAGGAG TTTATCGTCA GGCAGTCTAA CCAGCCCTTC
GGCTGCTTCT TGCAAAATGC CGTGCTGGAA AAATACCTAA GCGATGAGGT GGTGCAGGGG
ATCTGTACTC GCCTGTTTGA CGAGCTGCAT CAGACCTTCG AGCGGGTGCT GCAAGGGGCG
CAGCAGCGCG GTGAGTTGTC GGCAGGTGTC CAATGTACGC AGCTGGCAAG CTTTCTGGTG
ATGCAGATGC AGGGAATACG TGTGCTGGGC AAGGCGAGAC AGCAGGCGCG TATCGCTCAG
GCCCGTGAGG TGCTTATGGG TTATCTTAAA TCGCTAGCTG TGAGTGGCTA G
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| Protein sequence | MARSCNFDRQ EKLVEAMELF WQKGYADTSV ADLVDHLKIN RFSLYNSFGD KLSLYREALA
YYFDNHAMPN LTPLFAETAG LDELVTYLEE FIVRQSNQPF GCFLQNAVLE KYLSDEVVQG
ICTRLFDELH QTFERVLQGA QQRGELSAGV QCTQLASFLV MQMQGIRVLG KARQQARIAQ
AREVLMGYLK SLAVSG
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