| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2728 |
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| Symbol | |
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| ID | 4922924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3227282 |
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| End bp | 3228163 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164323 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094853 |
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| Protein GI | 127513656 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000677949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAATC GTAGACAAAA CAAGCCGCTA AACTCACGTC TGAGCCAGCG CCTGAACATG
TTCAATCGCC TTAAATTTAT CGCACCGCTT GTGGTGGTAC TGCCCCTTGC GGGCGGCCTA
ACGGGCTGCA CCAACCCCAA CACCCCGGCA GGGGAAGAGG GCTATGTGTT TGAGAAGCCG
CGCATCTTCG GCGCGGGTGG TTATCGCGGC ACCCTCATAG GCCCCAGCAA CTATGGGGTC
TCCCTGTGGC GCAACGAGGT GATCAACATC GATATGCGTC CCAACACCTA CACGGAAAAC
TTTAAGATCC TCGCCAAGGA CGATCTCAAC ATCAGCTTCA ACTTTCATGC GGTGATTGCC
ATCAAGTCGG GCACGGTGAA AGAGGTGGTA GAAAAATATG GCGCCGAGAA CTGGTATGTG
CGTTTCGTGC GCGAGACCTT CCGCACCTAT GTGCGCGACG AAGTGCAGCG CTACGACAGC
GTGGCGCTCA AGGAGAACCG CTCGGAGATC GCCCAGGCGG TGTCGGTCAA GCTCAAGGAC
TACCTTAAGA CTTCGCCTTT CCAGCTCAAC AATGTGATCG TGGGTAATAT CAACTATCCC
GACATAGTCG CCATCGCGGT AGAAAAGAAA CTGGCCGCCC AGCAGCTGTT GTCGGAGAAG
GAGACCCAGA AGGAGATCGC CCAGAAGGAT GCGGAGATCC GCATCGAAGA GGCCAAGGGT
ATCGCCCAGG CGCAGAAGAT CATCAACGAG ACCCTGACCC CCAACTACCT GCAGCACGAG
GCGATTAACG CCCAGCTGAA GATGGCGGAC TCGCCGAATC ACACTACCGT CTACATTCCG
GTTGGCACCA ACGGCATCCC TCTGATCAAG GGCGCCAAAT AG
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| Protein sequence | MFNRRQNKPL NSRLSQRLNM FNRLKFIAPL VVVLPLAGGL TGCTNPNTPA GEEGYVFEKP
RIFGAGGYRG TLIGPSNYGV SLWRNEVINI DMRPNTYTEN FKILAKDDLN ISFNFHAVIA
IKSGTVKEVV EKYGAENWYV RFVRETFRTY VRDEVQRYDS VALKENRSEI AQAVSVKLKD
YLKTSPFQLN NVIVGNINYP DIVAIAVEKK LAAQQLLSEK ETQKEIAQKD AEIRIEEAKG
IAQAQKIINE TLTPNYLQHE AINAQLKMAD SPNHTTVYIP VGTNGIPLIK GAK
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