Gene Shew_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2726 
Symbol 
ID4922922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3225951 
End bp3226403 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID640164321 
Producthypothetical protein 
Protein accessionYP_001094851 
Protein GI127513654 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000597817 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATTT GGGTCGATGC CGATGCCTGC CCAGGCGTGA TTAAAGATAT ACTGTTTCGC 
GCCGCCGAAC GCGCCGAGAT TGCCGTGACC TTAGTGGCCA ACCACGCCAT GCGGATCCCG
CCATCGCGTT TTATTCAGCT GGTGACTGTC TCCTCTGGGT TTGACGTGGC CGACAATGAG
ATAGTGCGGC GCGCGGCGCC TGGCGATCTG GTGATCACCG CCGATATTCC ACTGGCCTCA
GAGGTGATCG ATAAGGGCGC CCTGGCGCTG AACCCCAGAG GCGAGCTGTA TACCGAGCAT
AACATCAAGT CTATTCTCAA CATGCGCGAC TTTATGGACA CCATGCGTGC CAGCGGCGTG
CAGACCGGCG GCCCGGCGGC CATAGGCCAG AGCGAGAAGC AGGCCTTCGG CAATCAGCTG
GATCGCCTGA TCACTAAGTA TCATAAGCGT TAA
 
Protein sequence
MKIWVDADAC PGVIKDILFR AAERAEIAVT LVANHAMRIP PSRFIQLVTV SSGFDVADNE 
IVRRAAPGDL VITADIPLAS EVIDKGALAL NPRGELYTEH NIKSILNMRD FMDTMRASGV
QTGGPAAIGQ SEKQAFGNQL DRLITKYHKR