| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2718 |
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| Symbol | |
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| ID | 4922948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3216809 |
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| End bp | 3219220 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164313 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001094843 |
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| Protein GI | 127513646 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000743296 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTTAG CTGTTTCCGC ATTAGCAGTG TCATCTGCAC TCATCCTTCC TGGCGTCCAC
GCTGAAGATC AACAAGCGAC CTTAGATCAA CAAGCCAGCT TCGAAAAAAT CGAGATCATA
GGTTCACGTA TCGCACTACG TACTGCCACA GACAGCGTGG CACCGGTGGA CATTATTACC
GCAGAGCAGC TCGAATCGAC GGGGATGACA GAAACGGCTA AGGCACTGCA ATTTGCCGCA
CCCAGCTACA GCTTTCCATT CTCATCGGTA ACCGATGGCT CAGATGCGGT GCGCCCGGCG
AGCCTGCGCG GCCTATCGCC GGATCACACC TTAGTCTTGG TCAACGGCAA GCGTCGTCAC
GGCTCGGCAC TGGTCCATCT GAGTGGCACA GTAGGTAAAG GCTCATCTAA CGTCGACCTG
AACGCCATTC CGATGACGGC AATCAAGCGT ATCGAGATCC TGCGTGACGG TGCGTCGGCG
CAATATGGCT CCGATGCGAT TGCCGGCGTC ATCAACGTGG TGCTAAAAGA CAATGAGCAA
GGTGGTAGCC TATCCGCACA AGCTGGCCAA ACCTACGCGG GTGACGGCGA ACAGTGGCGC
TTGGGTGCCA ACCATGGCAT CGCCCTGGGT GACGATGGCT TCGTTAATGT CTCACTCGAG
GCACACCATA AAGACAGCAC TAACCGCGCT GGGCTAGATC CTCGCCAGCA GTATCCGCAG
TTAGCCGATG GCTCACCGGA TCCTCGCGAA GCCACCTTTA ATCGCAAGAG CCATCAAGTT
GGCGACGCCG AATACGACAA CCTAGGCCTG TTCATCAACG CCGCCAAGGC CATCTCAGAC
AACGGCGAGC TATACGCTTT CGGTGGCGTG AGCAAACGCG AAACTAAATC AGGCGCCTTC
TACCGCAGAG CCCTGGATAA GCGTAACTTA ACCGAAGTTT ATCCCGACGG TTTCTTACCC
CAGATCAACC CTGAAATAAT CGACACCTCG TTAGTGCTAG GTTATGAGTT CACCCTGGGT
GAATGGAATA TCGATACCTC CGCAGGCCAT GGCGAAAACT CATTTAACTA CAACATTGTT
AACTCATTAA ACGCATCTAT GGGCCCCGAT AGCCCGACCG AATTTGATGC CGGCACCTTG
TCGACCCGTG AAACCAACTT GAATATCGAT GCGTCGCGCT ATTTTAACTT TGCAAACGAC
TCAGAGATCC TCTTTGCCGC GGGTGTATCA TGGCGCAAGA ATGGCTACCA AATTGAAGCG
GGCGAGAGTG CTTCCTACAT CAATGGCGGT TTCGATAATC GCGCCGCCGG CAGCCAGGGC
TTCTCGGGCT TTACCCCAGA ATCTGAAGTC GACGAGACCC GAGATAACAC AGGCGTTTAT
GTCGAGCTTG AAAACCAGTT AACCGATGAC TTTTACTGGG CGGCGGCGCT GCGTTACGAA
AATTATTCAG ACTTCGGCGA CAACACCAGC TGGAAGCTAG CGGGCCGCTA TGACTTTACC
GACAACCTGG CCCTGCGCGG TACCATCAAC ACAGGCTTTA GAGCGCCAAG CGTGCAGCAG
CTGTACTTCA GCAACATCTC TACCCTGTTT AACCCTGATC CTGTCACGGG TCAGTTGGTA
CCGACAGAAT CGGGCACCTT CAACACCCTG TCACCCGTAA CAAAAGGGCT AGGGATCAAT
GAACTAGAGC CAGAGTTATC ACAGTCTTTC AGTCTAGGTC TGGTCTATCG CAATGATGCG
GGCCTGGCAC TGACCTTGGA CGCCTATCAG ATCTCTATCG ATGACCGAAT CATCTTGTCG
AGCTCAGTCA CGCCGGATGA TTCACCTGCG GTCGCTGAGG CCCTTGCCGG CACCAACGCC
GAATCGGCAC GCTTCTTCAT CAACGCCGTC GATACCCGTA CCCGAGGGGT TGATCTGGTG
ATAAGCCAGG ATTTTGATAT CGGCGCTTGG GGCGATCTGC AAGCCAACCT GGCCTATGCC
TATAACAAAA CGGAAATTCA AGACATTCAT TTCCCGCAGG TGTTAGACGG CGTAGGTAAA
GAGCTCTTCG ATCGTATCGA ACAAACTCGT ATGACCGCGG CCACGCCAAA CAACACAGGC
AACCTGGGAC TCACCCATAG GCTAGGTGAT TTCAAGACCA ACGTTCGTCT AAGCTACTTT
GGCGATTACA CAGTGGGTTA TTCCTCAGGC GATGTCACTT ACAGCGACCA ATGGGTAATG
GATATGTCGG TGCAATACGC GGCAACTGAG GCGCTAAGCT TTACTGCCGG GGCGCAAAAC
CTGTTCGATG TCTACCCGGA GAAGCGTCCG GACAGCAATA ACTTCAATGG CATCTTCGTC
TATCCATTAA CCAATACGCC ATTTGGCTTT AATGGTGGTT ACGTCTTCTT AGAAGCCAAA
TATACCTACT AA
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| Protein sequence | MRLAVSALAV SSALILPGVH AEDQQATLDQ QASFEKIEII GSRIALRTAT DSVAPVDIIT
AEQLESTGMT ETAKALQFAA PSYSFPFSSV TDGSDAVRPA SLRGLSPDHT LVLVNGKRRH
GSALVHLSGT VGKGSSNVDL NAIPMTAIKR IEILRDGASA QYGSDAIAGV INVVLKDNEQ
GGSLSAQAGQ TYAGDGEQWR LGANHGIALG DDGFVNVSLE AHHKDSTNRA GLDPRQQYPQ
LADGSPDPRE ATFNRKSHQV GDAEYDNLGL FINAAKAISD NGELYAFGGV SKRETKSGAF
YRRALDKRNL TEVYPDGFLP QINPEIIDTS LVLGYEFTLG EWNIDTSAGH GENSFNYNIV
NSLNASMGPD SPTEFDAGTL STRETNLNID ASRYFNFAND SEILFAAGVS WRKNGYQIEA
GESASYINGG FDNRAAGSQG FSGFTPESEV DETRDNTGVY VELENQLTDD FYWAAALRYE
NYSDFGDNTS WKLAGRYDFT DNLALRGTIN TGFRAPSVQQ LYFSNISTLF NPDPVTGQLV
PTESGTFNTL SPVTKGLGIN ELEPELSQSF SLGLVYRNDA GLALTLDAYQ ISIDDRIILS
SSVTPDDSPA VAEALAGTNA ESARFFINAV DTRTRGVDLV ISQDFDIGAW GDLQANLAYA
YNKTEIQDIH FPQVLDGVGK ELFDRIEQTR MTAATPNNTG NLGLTHRLGD FKTNVRLSYF
GDYTVGYSSG DVTYSDQWVM DMSVQYAATE ALSFTAGAQN LFDVYPEKRP DSNNFNGIFV
YPLTNTPFGF NGGYVFLEAK YTY
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