| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2708 |
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| Symbol | |
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| ID | 4922993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3203957 |
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| End bp | 3205171 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164303 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_001094833 |
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| Protein GI | 127513636 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000751888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTAAGC AAGACAATAA GCCAGATGTG CAAGAGAATT ACTATGCCCA CGGCTCGTCG
ATGCGTAGCT TCCTGCGCTC GCTGCTTTAT GCCCATGGCC GCAGCACTAA AGGCAAGGTG
CACGTTCGCG ATGCGATCGA TGTAAAACGT ACCATGACCC TGGTGGGTCT GTGTCTGCTG
CCGGCGATTC TGTTCGGCAT CTATAACCTG GGTCTGCAGG CGCAGCTGGC GCTGGCTTCT
GGCTTGACCA CGCCCGATGT TTGGCAGCTA CTGCCGTTCA ATGCCATCAC CGGCGGCCTC
GGCGAGCAGA GCGGTTTCTT TGGCCTGTTT GGCTATGGCC TGAGCTTCTA CCTGCCTATC
TATCTTACCG CGCTGTTGGT GAGCCTGTTT TGGGAGATGG TGTTCGCCAA GGTGCGTCGC
CAGGAGCTGC ATGAAGGCTT CTTCGTCACC GCCTTGCTGT TTACCCTGAT CCTGCCGGTA
TCGACACCGC TGTGGATAGT GGCCCTTGGT ATCACCTTCG GGGTGATCAT GGCCAAAGAG
GTGTTTGGCG GCATGGGGTA CAACTTCCTC AACCCTGCGC TGGCTGGTTA CGCCTTTATC
TACTTTGCCT ACCCGACCGA GGTGGCGCAG ATTGCCCAGT TTGTGGCGGT CGATGGCTTC
TCGGGAGCGA CAACCTTGAT TCAGACTGCT GCGGGCAAGA TGAGCTTCGA GGGTTACACC
TGGTATCAGG CCTTCAGCGA TCCGCTGTGG TGGGATGCCT TCTTCGGCTT CACCGTCGGC
TCTATCGCCG AGACCAGCAC CCTGGCCATT CTGATCGGCG GCCTGTTGCT GCTGTTGACT
CGCCTGGCCG ACTGGCGTGT GGTGGCCGGT GTGATGGCCG GTATGGTGGC AACCGCCGTG
CTGTTCAACC TAATCGGTTC GGCCAAGAAC GAGATGTTCG CCATGCCTTG GACCTGGCAT
CTGGTCACCG GCGGCTTCGC CTTGGGGATG ATGTTTATGG CAACAGATCC TGTGACCACA
GCCTATACCC GTCAGGGCAA GTTTGCCTAC GGCGTCCTGA TCGGCTTCAT GACGGTACTT
ATTCGCGTGC TGAATCTCAA GATGCCTGAA GGGATCATGC TGGCGATTCT GTTTGCCAAC
CTGTGGGCAC CACTCTTCGA TTACCTGGTG GCGCGCAGCA ACATGAAGCG GAGGCTGAAA
CGCAATGCCT TATAA
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| Protein sequence | MSKQDNKPDV QENYYAHGSS MRSFLRSLLY AHGRSTKGKV HVRDAIDVKR TMTLVGLCLL
PAILFGIYNL GLQAQLALAS GLTTPDVWQL LPFNAITGGL GEQSGFFGLF GYGLSFYLPI
YLTALLVSLF WEMVFAKVRR QELHEGFFVT ALLFTLILPV STPLWIVALG ITFGVIMAKE
VFGGMGYNFL NPALAGYAFI YFAYPTEVAQ IAQFVAVDGF SGATTLIQTA AGKMSFEGYT
WYQAFSDPLW WDAFFGFTVG SIAETSTLAI LIGGLLLLLT RLADWRVVAG VMAGMVATAV
LFNLIGSAKN EMFAMPWTWH LVTGGFALGM MFMATDPVTT AYTRQGKFAY GVLIGFMTVL
IRVLNLKMPE GIMLAILFAN LWAPLFDYLV ARSNMKRRLK RNAL
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