| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2704 |
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| Symbol | |
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| ID | 4922989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3200581 |
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| End bp | 3201798 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164299 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001094829 |
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| Protein GI | 127513632 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0023982 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATGG CAATAGGCAT AGGCATGTTC ACCATAGTGG TGTGTGTGCT GGTGATGGTG
ATTTTAGTCG CCAAGAGCAA GTTGGTGATC AACGGTGACG TGAGCATCCG CATCAACGAC
GACGATGACA AGAGCATAAC CACGGCGGCG GGCGATAAGC TACTGGGCGC CCTGGCGAGC
AAGAATATCT TTATTCCGTC GGCCTGTGGC GGCGGCGGTA CCTGCGGTCA GTGCCGGGTG
AAGGTTAAGT CGGGTGGCGG CGATATCCTG CCGACCGAAC GCGACCATAT CAACAAGAAA
GAGGCCAAAG AGGGTTGTCG TCTGGCCTGT CAGGTGGCGG TGAAGACAGA CATGGAGCTT
GAGCTGGAAG AGGAGATCTT CGGCGTCAAG AAGTGGCAGT GTGAGGTGAT CTCTAACGAT
AACCAGGCCA CCTTCATCAA GGAGCTGCTG CTCAAGCTGC CCGAAGGGGA AGACGTGAAG
TTCAAGGCGG GCGGATACAT TCAAATTGAG GCGCCGGCTC ACGAGGTGAA ATACAGCGAT
TTCGATATCC CGACCGAGTA CCGTGACGAC TGGGAAAAGT ATGGCCTGTT CGATCTGGTC
TCGACCGTAG AGGAAGATGT GCTGCGCGCC TACTCCATGG CCAACTACCC GGATGAGAAA
GGGGTGATCA TGCTGAACGT GCGTATCGCC ACGCCGCCAT CAGAGGGGCT GCCACCGGGT
AAGATGTCCT CTTACATCTT TAACCTCAAG GCGGGCGATA AGGTGACTAT CTCAGGGCCA
TTTGGTGAGT TCTTCGTGAA GGAGACGGAC GCCGAGATGG TGTTTATCGG TGGTGGTGCA
GGCATGGCGC CGATGCGCTC ACACATCTTT AACCAACTCA AGGGCGAGCA GACCAAGCGT
AAGATGACCT TCTGGTACGG TGCCCGTTCA CGCCGTGAGA TCTTCTATCA GGAGGAGTTT
GACGCGCTGG CGGCGGAAAA CGACAACTTC GAGTGGCACG TGGCGCTGTC GGACCCGCTC
CCAGAGGACA ACTGGGACGG CTACACAGGC TTCATCCATA ATGTGCTCTA TGAGAACTAC
CTGAAGAATC ACAAGGCGCC GGAAGACTGT GAGTTCTACA TGTGTGGCCC TCCGATCATG
AACTCCTCGG TGATCAACAT GCTAGAAAGC CTAGGGGTTG AGCAGGAAAA CATACTGTTG
GATGACTTCG GCGATTAA
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| Protein sequence | MEMAIGIGMF TIVVCVLVMV ILVAKSKLVI NGDVSIRIND DDDKSITTAA GDKLLGALAS
KNIFIPSACG GGGTCGQCRV KVKSGGGDIL PTERDHINKK EAKEGCRLAC QVAVKTDMEL
ELEEEIFGVK KWQCEVISND NQATFIKELL LKLPEGEDVK FKAGGYIQIE APAHEVKYSD
FDIPTEYRDD WEKYGLFDLV STVEEDVLRA YSMANYPDEK GVIMLNVRIA TPPSEGLPPG
KMSSYIFNLK AGDKVTISGP FGEFFVKETD AEMVFIGGGA GMAPMRSHIF NQLKGEQTKR
KMTFWYGARS RREIFYQEEF DALAAENDNF EWHVALSDPL PEDNWDGYTG FIHNVLYENY
LKNHKAPEDC EFYMCGPPIM NSSVINMLES LGVEQENILL DDFGD
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