| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2702 |
|---|
| Symbol | |
|---|
| ID | 4922987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3197490 |
|---|
| End bp | 3198260 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640164297 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001094827 |
|---|
| Protein GI | 127513630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0231204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA AGCCAGCGGG AAGCGAGAGC ACGGCACCTA AGAGCACTTA TACTGTGTCG
GCGCGGGGCA AGGCGGATCA TCAGTCAGTG ATTAAGTTTT TAAAACAAAA CTTTGCCGCG
GTGCCCCTTG GGCAGATTGA GAGTGTATTT GGTTTCGTCG AGCCATCGAC CCTATATGGC
GGACGTTTCT ATCTGATGCG TCAGCTGTCT GAGCGGGACA CGGGCCTGCT GGCGGATCAT
GGTATTGGGC TTAGAATTCC CTTTACCAAT CACTTTGCCA CCAAGGAGGA GTTCGACGCC
AATCGCGCCT TGCTGGCTAA GTATCATCAC AAGCGCAACT CTATTATCTG CACAAACGAT
GACCTCGCTT ACTGGATCAA GCAGGAATTT CCCGACTATG ACATCGAAGC CAGCGTGATA
AAGAACCTGC TAAAACCTGA GCAGATCGAA GAGGCCTTTG GGCTCTACGA TACCCTGGTG
CTTCCTATGG TGCTCAACGA TGATGAGGCC TTCTTGGCGG CCTTGGCGCA GAAAGATCGT
ATTCGTTTGT TTGCCAATGC AGGTTGTGCC TACACCTGTC CGGCGCGAAT CTGTTACAAG
TCTATCTCTA AGTTTAATAA GGGGCTGGGG GGCGAGTTTA AGTGTTCCCA AGATCTTAAG
GCGAGAGAAA TGCAGGGCAT GATAGATTTC GAACTACAAA GGCTGAGAAA CCTGGGATTT
CATAAGTTTA AACTGCTCAG GGCGAGGGCC GGTGCCCAGA CTGGCTATTA G
|
|---|
| Protein sequence | MSDKPAGSES TAPKSTYTVS ARGKADHQSV IKFLKQNFAA VPLGQIESVF GFVEPSTLYG
GRFYLMRQLS ERDTGLLADH GIGLRIPFTN HFATKEEFDA NRALLAKYHH KRNSIICTND
DLAYWIKQEF PDYDIEASVI KNLLKPEQIE EAFGLYDTLV LPMVLNDDEA FLAALAQKDR
IRLFANAGCA YTCPARICYK SISKFNKGLG GEFKCSQDLK AREMQGMIDF ELQRLRNLGF
HKFKLLRARA GAQTGY
|
|---|
| |