| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2700 |
|---|
| Symbol | |
|---|
| ID | 4922985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 3195374 |
|---|
| End bp | 3195763 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640164295 |
|---|
| Product | antibiotic biosynthesis monooxygenase |
|---|
| Protein accession | YP_001094825 |
|---|
| Protein GI | 127513628 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1359] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.420345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0225241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAT TTAGGTTTTT AACCAGCGGA GAGCTACAGA TGTCAACACG CGTTTTTGTG
ATAGCCCAGT TTCGTCCCAA GGCGGGAAAA GCCGCCGAAC TCTTCGAGAT ACTCAAGGCT
CTGGAGCCCG ACTCACTGCG GGAACAGGGC TGTATTCAGT ACATTCTCAC CCGCCAGATT
GACCATCCGA GCGCCAGTCG CACCGACTAC CCTATCGTAT TCAACGAGAT CTGGGCCGAT
GGCGAAAGCT GGGCGGCTCA CGGCCGTCGC CAACAGATCA AACACTTCTT CGACACTCAG
GTGAGCTCCC CTACCGGCCT GGTGGATGAT GCCATAGTGA CCGCCTATAC CGACGAGGGC
TACGAATACG ACGCCCCGGT ATTTATCTAG
|
|---|
| Protein sequence | MILFRFLTSG ELQMSTRVFV IAQFRPKAGK AAELFEILKA LEPDSLREQG CIQYILTRQI
DHPSASRTDY PIVFNEIWAD GESWAAHGRR QQIKHFFDTQ VSSPTGLVDD AIVTAYTDEG
YEYDAPVFI
|
|---|
| |