| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2696 |
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| Symbol | |
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| ID | 4922981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3190749 |
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| End bp | 3192203 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164291 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001094821 |
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| Protein GI | 127513624 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000110077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.128468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC AGCGCGCCCC ACAGGGCAAA CTCAACTCCC TCAGGGTTCG TCTGATCCTC
AGCGCCCTGC TGCTGATATT GCTGCTGCTG CCCACCATTG GCTTCGCCCT CAACAACGCC
TTTAAACAAC AGGTGATGAC CAACGTCAGA GAGCAGCTAA GCGCCTACCT CTATTCTGTG
CTGGCGGTGG CCGAGATGGA CGAAGGCAAG CTCTATATGC CAGAGGCGCT GCTGGAGAAT
CAGTTCAATG TCATAGGCTC AGGCCTCTAC GCAGTGATCG ACAGCGCAGG CGCTCATGGA
ACGGATAGCG TCCACCAGGG TGACAACCAA AATGACAGCC AGAGCGATAA CCAAACTGAA
AGTGACCGCC AGGCCAGCGT TGAGCCCCTC TGGTCATCCA ACTCCTTTCT TGGGTTAAAC
ATCACGACTC CCCTGCCCCA TCCTAAGGTG GGACGCAGCG AATTTGGCGA GCAGATGTTA
GAGCAGCAGC CCCATCTCAT CTACAGCTTC AGCGTACGCT TTGCCCCCGG CGAGGCCCAG
CGCCAGAGCG CGCCAATCAC CATCCACATC ATCAAAGATC TCGACGGCGT GGCGCAGCAG
CTCAAGGCCT TTAGCCAACA TCTGTGGAGC TGGCTGGTGG TGTTGATGCT GGTACTGCTG
GCGATTCAAT TTGCCTGGTT GGCCTGGACA TTAAAACCCC TGGCGCGATT CAGAGAGGAG
CTGGGACAAG TACAACGCGG CGAGGCGGAG CAGCTCAGCG GTCATTACCC CAATGAACTG
CAGGCGGTGG CCAAACAGCT CAACACACTG CTGAGCACAG AGCAGCGCCA GCGCAGCCGC
TATCGCAACG CCCTCTCTGA CTTAGCCCAC AGCCTCAAGA CGCCGCTGGC GGTGATCCAG
AGCCAGAAAG ATCTCAGCCC AACCTCTCTT GAGCAGGTTG GGCAGATCAA TCGCACCATA
GGCCACCAGC TCAAGCGTGC CCAGAGCGCC GCCGGTAACG CCTGGCACCT GGGGATCAAG
GTCAGCCTAG TCTCCGACAA GCTACTGCGC ACCCTGGTCA AGATCCATCC AGGGGTAGCC
CTCAGCTATG GCAAGGCTCC TGAGGAAAAC CAGATCTTCT ACGGCGATCA GAGCGATCTT
ACAGAGATGC TGGGCAACCT GCTGGATAAC GCCTGTAAGG CGGCTAGAAA CAAGGTGATG
CTGAGCGTCG ACGCTGACAA TGGAAAGCTC ATCATCAGCG TCGAAGATGA CGGCGCCGGC
GTTAGCCCAG AGCAGCGTCA GCTCATACTC GAGCGTGGAC GACGCGCCGA TACCTATGAG
AAGGGCCACG GCATAGGGCT CGCCATCGTC GGCGACCTGG TGCAGAGCTA TCAGGGAGAG
CTCACCATAG ACAGCTCGGC GACGCTTGGC GGCGCCAAAT TCATCCTGAG CTTCCCCCAA
CAGTTCGCCG AGTAG
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| Protein sequence | MSNQRAPQGK LNSLRVRLIL SALLLILLLL PTIGFALNNA FKQQVMTNVR EQLSAYLYSV
LAVAEMDEGK LYMPEALLEN QFNVIGSGLY AVIDSAGAHG TDSVHQGDNQ NDSQSDNQTE
SDRQASVEPL WSSNSFLGLN ITTPLPHPKV GRSEFGEQML EQQPHLIYSF SVRFAPGEAQ
RQSAPITIHI IKDLDGVAQQ LKAFSQHLWS WLVVLMLVLL AIQFAWLAWT LKPLARFREE
LGQVQRGEAE QLSGHYPNEL QAVAKQLNTL LSTEQRQRSR YRNALSDLAH SLKTPLAVIQ
SQKDLSPTSL EQVGQINRTI GHQLKRAQSA AGNAWHLGIK VSLVSDKLLR TLVKIHPGVA
LSYGKAPEEN QIFYGDQSDL TEMLGNLLDN ACKAARNKVM LSVDADNGKL IISVEDDGAG
VSPEQRQLIL ERGRRADTYE KGHGIGLAIV GDLVQSYQGE LTIDSSATLG GAKFILSFPQ
QFAE
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