Gene Shew_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2687 
Symbol 
ID4923196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3180622 
End bp3181428 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content57% 
IMG OID640164282 
Productmolybdate ABC transporter periplasmic molybdate-binding protein 
Protein accessionYP_001094812 
Protein GI127513615 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID[TIGR01256] molybdenum ABC transporter, periplasmic molybdate-binding protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.290945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC AGTGGTTTCT AGGCACGCTT TTCATCGCAG GCATGAGCAC TCAAGTGATC 
GCTCATGAGG CGCCCATCGA ATTTCGCGCC GCCGGCAGCC TCAAGGCCGC CATGACAGAG
GTGATTGGCG CCTATCAGGC CAAGGGCCAT AGCGAGGTTG CCCCTCAGTT TGCTCCATCT
GGACTGCTTA GAGCGCGTAT CGAATCCGGT GAGAAGGTGG ATCTCTTTGC CTCGGCCAAC
ATGAAGCATC CTACTACTTT GAGCCAAGCT TCCCGCAGCG GCGATGTGGT GATGTTTGCC
CGCAACAAGC TCTGCGCCCT TGCGCAGCCT GAGGTTGAAC TCTCAAGCGA TACTCTGCTG
ACCCAGATGC TCAATAGCAA GATACGTCTT GGCACCTCTA CCCCTAAGGC AGACCCCGCC
GGTGACTACG CCTTTAAGGT GTTCGAGCGC GCCGAGGCCA TCTCATCCGG CGCCCAGCAG
CAGCTGGAAA CTAAGGCACT TAAGCTAACC GGCGGCCCGG ACAGTGCTAA GCCACCTAAA
GGCCGTAATC CCTACGGCTG GGTGATGGAG AACAAGCAGG CGGATATCTT CCTCACCTAC
TGCACCAACG CCGTGCTGGC GCAGAAAGAG GTCAAGCCCC TCAAGATAGT GCAGCTGCCT
GAAAACCTCA GTGTCGGCGC CAACTACGGC CTGACCGTCA TTCAGGATGC GCAGCCCCAT
GCCGCAGATC TGGCGCTCTT TATCCTGTCA CCACAGGGGC AGAAAATTCT GGCCAGCTAC
GGCTTCGATA CTCCAACTCT GCCCTAG
 
Protein sequence
MKYQWFLGTL FIAGMSTQVI AHEAPIEFRA AGSLKAAMTE VIGAYQAKGH SEVAPQFAPS 
GLLRARIESG EKVDLFASAN MKHPTTLSQA SRSGDVVMFA RNKLCALAQP EVELSSDTLL
TQMLNSKIRL GTSTPKADPA GDYAFKVFER AEAISSGAQQ QLETKALKLT GGPDSAKPPK
GRNPYGWVME NKQADIFLTY CTNAVLAQKE VKPLKIVQLP ENLSVGANYG LTVIQDAQPH
AADLALFILS PQGQKILASY GFDTPTLP