Gene Shew_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2683 
Symbol 
ID4923192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3176734 
End bp3176985 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content52% 
IMG OID640164278 
Producthypothetical protein 
Protein accessionYP_001094808 
Protein GI127513611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.396984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.288529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC CCAACAAGAA AGCGCCCAGT CGCACCGTCG AAATTTTCTG TGCCCAGTGT 
AAGACCCGGC TGTTTAAGTA CCGTAAGGGG GGTAAAGGTG CACTGGTCAA ATGCTTCAAG
GAGCGCATCG TAGAAGATGA TACGCACACG CCCTGCCATT GCCCAAACTG CGAGCAGTGT
TTTGCCCGCG ATACCTTGAT TAGAGGCGTA CCCGCTTTTA AGATAATTGG TGGCAAGGCA
ACAATGAAAT AG
 
Protein sequence
MARPNKKAPS RTVEIFCAQC KTRLFKYRKG GKGALVKCFK ERIVEDDTHT PCHCPNCEQC 
FARDTLIRGV PAFKIIGGKA TMK