Gene Shew_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2680 
Symbol 
ID4923133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3173179 
End bp3173466 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content51% 
IMG OID640164275 
Productputative ferredoxin 
Protein accessionYP_001094805 
Protein GI127513608 
COG category[C] Energy production and conversion 
COG ID[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.606102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CAGTCAATGT CGACGTGAAA TTGGGTGTCA ATAAGTTCTA TGTCGATGAG 
GGACACCCAC ACATCATTCT AAAAGACAAC CCGGACATTA AGGAGTATCG CAAGCTGGTA
AACGCCTGCC CTGCGGGCCT CTATAAGCTG GAGCAGGACG GCAGCATACG TTTCGACTCC
GCCGGTTGCC TGGAATGCGG CACCTGTAAG TTTCTCTGTG GCGAGACCAT TCTAGAGAAA
TGGGAATACC CAAGGGGCAC CTTCGGTATC GAATACCGCT ACGGATAA
 
Protein sequence
MTEAVNVDVK LGVNKFYVDE GHPHIILKDN PDIKEYRKLV NACPAGLYKL EQDGSIRFDS 
AGCLECGTCK FLCGETILEK WEYPRGTFGI EYRYG