Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2680 |
Symbol | |
ID | 4923133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3173179 |
End bp | 3173466 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640164275 |
Product | putative ferredoxin |
Protein accession | YP_001094805 |
Protein GI | 127513608 |
COG category | [C] Energy production and conversion |
COG ID | [COG2440] Ferredoxin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.606102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG CAGTCAATGT CGACGTGAAA TTGGGTGTCA ATAAGTTCTA TGTCGATGAG GGACACCCAC ACATCATTCT AAAAGACAAC CCGGACATTA AGGAGTATCG CAAGCTGGTA AACGCCTGCC CTGCGGGCCT CTATAAGCTG GAGCAGGACG GCAGCATACG TTTCGACTCC GCCGGTTGCC TGGAATGCGG CACCTGTAAG TTTCTCTGTG GCGAGACCAT TCTAGAGAAA TGGGAATACC CAAGGGGCAC CTTCGGTATC GAATACCGCT ACGGATAA
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Protein sequence | MTEAVNVDVK LGVNKFYVDE GHPHIILKDN PDIKEYRKLV NACPAGLYKL EQDGSIRFDS AGCLECGTCK FLCGETILEK WEYPRGTFGI EYRYG
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