Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2679 |
Symbol | |
ID | 4923132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3171890 |
End bp | 3173182 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164274 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001094804 |
Protein GI | 127513607 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.678719 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAG AAGCATTTGA CGCGATCATC GTTGGCGCCG GGCTCGCAGG CTGCGTCGCC GCCTATGTCT TGGCCAAAGA GGGCGCCGAT GTATTGGTGA TCGAGCGCGG TAACTACGCC GGCAGCAAAA ACATGACCGG CGGCCGCCTC TACGCCCATA GTCTGGAAAG GATCATCCCA GGCTTTGCCA AGGAGGCTCC CATAGAACGC AAGGTCACTA AGGAGAAGGT CACCTTCTTG ACGGATGATA CCGGCGTCAC CCTGGATTAC CACAACGGCC GCGATCAGAG CCCGCTGCAG GAGTCTTACA CCCTGCTTAG GGGCGAGTTT GACCAGTGGC TCATGGGCAA GGCCGAAGAG GTGGGCGCTC AGTTCATCAC AGGGATCCGA GTGGACGAGA TCCTCACCCA GGATGGCAAG GTTATCGGTG TTAAGGCCGA CGGCGATGAG CTTACCGCCA AGGCGGTGAT CTTGGCCGAA GGGGTCAACC CCATTTTGGG CGAACAGCTA GGCATGGTGA AGCCTAAGGT AAGCGCCGAT GCTATGGCGG TCGGTGCCAA GGAGCTAATC GAGCTCCCCG AGTCGGTGAT CAAAGACAGA TTTAACCTCA AGGATGACGA AGGCGCCGCC TGGCTATTTG CCGGCTCCCC CTCCAATGGC CTGATGGGTG GCGGCTTTAT CTATACCAAC CGCAATAGCA TCTCCCTAGG CATAGTGTGT GGCCTGCATG GCATAGGTGA GTCGGATAAG AGCGTGCCAC AGATGCTGGA AGACTTTAAG AATCACTCGC TCATCAAGCC TCTCATCGAA GGTGGCAAGC TACTGGAATA TTCAGGCCAT GTAGTGCCCG AGGCGGGTCT CAACATGGTG CCTAAGCTGG TTGACCATGG CGTGCTGATC ACCGGCGATG CTGCGGGATT CTGCCTAAAC GTCGGTTACA CGGTTCGCGG CATGGATCTC GCCATCGCCT CTGGAGAGGC TGCGGCCAAG GCAGTACTCG CGGCGCGCGC CCAGCAAGAC TTCTCAGCCC AGGGGCTGAG CAGCTACCAG AGCCTGCTGG AAGAGAGCTT CCTGATGAAG GACATGAAGC TGTACAAGCA GCTCCCCGCC TTCATGGAGA CGCCGCGCAT CTTCAATCAG TATCCAAAGA TGGTGGCCGA CATCATGCAC GAGATGTTCA TCATAGACGG AACCCCTGCG CAGCCACTAC GCAAGACGTT GCTGAAACAC TGCAAAGAGG TGGGTTTCAT GAACCTAATC AAAGATGGTT ATAAAGGAGT CACATCAATA TGA
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Protein sequence | MSEEAFDAII VGAGLAGCVA AYVLAKEGAD VLVIERGNYA GSKNMTGGRL YAHSLERIIP GFAKEAPIER KVTKEKVTFL TDDTGVTLDY HNGRDQSPLQ ESYTLLRGEF DQWLMGKAEE VGAQFITGIR VDEILTQDGK VIGVKADGDE LTAKAVILAE GVNPILGEQL GMVKPKVSAD AMAVGAKELI ELPESVIKDR FNLKDDEGAA WLFAGSPSNG LMGGGFIYTN RNSISLGIVC GLHGIGESDK SVPQMLEDFK NHSLIKPLIE GGKLLEYSGH VVPEAGLNMV PKLVDHGVLI TGDAAGFCLN VGYTVRGMDL AIASGEAAAK AVLAARAQQD FSAQGLSSYQ SLLEESFLMK DMKLYKQLPA FMETPRIFNQ YPKMVADIMH EMFIIDGTPA QPLRKTLLKH CKEVGFMNLI KDGYKGVTSI
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