| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2670 |
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| Symbol | |
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| ID | 4923123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3160362 |
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| End bp | 3161273 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640164265 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001094795 |
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| Protein GI | 127513598 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.38872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA ATATTCCGCT AAGAGCACTG CAGATATTTG AGGCATGTGC CAGATTAGAA
AGTTGTTCCC TCGCGGCCAA TGAGCTGTGT ATAACCCAGA GTGCGGTGTC GCAGCAGATA
AAGCAGCTGG AAGACTATTT CTTAGAGAAG TTATTTTACA GGCAAGGCGG AAAGATCAAT
CTTACCGAGG CGGGCATAGA GCTCAGAGAG CGCCTGGCAC CTGTGTTTTA CGATCTCAAC
AGCGTCTGCT CCAGCCTGGT GCAGAACATG GCGGGTGAGG TGAGGGTGCA TTCCTATACC
TCGCTGGCGG CCAGATGGCT GGTGCCTAAG ATGGAGCAGC TTAGGCAGAT GTACCCGGAG
CTCAATATCA ATGTCGGCAT GTTCCAGAAT GATATTGAGA TGAGTGACAT GATCGCCGAT
ATCTTTATCG TCACCCGGGA ATGTCAGGAC GGTTATACCA TCATCCCTCT GGTCACCGAG
AAGCTGGTGG CCTTCTGCAG CCCAGATTAC CTTGCTCAGT CACAGGGGAT CAGCCTGGCG
ACCCTAGATC AACATTGTCT GCTCTATTCC AAACATAAAG ACTATGGCGT CGATTGGGAT
ACCTGGTTTA GAAACAATGA TATCGCCATC AGTCCCAATC AGAAGAAGAT CTTCTTCAAT
CACAACATGC TGGCGGTGCA AGCGGCTATC TATGGCCAGG GGATAGTATT GGGGCTGGAG
CAGACCCTCA AAGTGGAGCT GGACTCGGGA AATCTGGTGA AACTGGACCT GCCGACTTGT
CTTTCGGGGC TGACCTATTA CATCGCCTAC AAGACCTCCA AGAAGCGTGA CGCCCGTATC
ATGCGTATCG TCGACTGGAT CATCGACAAC TATCCGGGGG ATCATCCGGG AGATCGTACC
TTGGCGCGTT AA
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| Protein sequence | MNNNIPLRAL QIFEACARLE SCSLAANELC ITQSAVSQQI KQLEDYFLEK LFYRQGGKIN
LTEAGIELRE RLAPVFYDLN SVCSSLVQNM AGEVRVHSYT SLAARWLVPK MEQLRQMYPE
LNINVGMFQN DIEMSDMIAD IFIVTRECQD GYTIIPLVTE KLVAFCSPDY LAQSQGISLA
TLDQHCLLYS KHKDYGVDWD TWFRNNDIAI SPNQKKIFFN HNMLAVQAAI YGQGIVLGLE
QTLKVELDSG NLVKLDLPTC LSGLTYYIAY KTSKKRDARI MRIVDWIIDN YPGDHPGDRT
LAR
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