Gene Shew_2664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2664 
Symbol 
ID4923316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3139363 
End bp3140217 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID640164259 
Producttranscriptional regulator, putative 
Protein accessionYP_001094789 
Protein GI127513592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA AGCCTAACCA CAAGACGCAG CGCCGGGACT CGCAGACCGC GGCGCGAAAA 
CTCAGCGCCA GTGAATATAG GCACAAGAAT GCCACCACCA CCCCTGAGAT GCGTCAGTTT
ATCCAGGAGT CGGAACTACC GGTGAGCCAG CTGGCAAAGG TGCTCAACAT CAGCGAAGCC
ACGGTGCGTA AATGGCGCCG GCGCGACTCC ATCGAAGACA CGCCCAACAC CCCCCACCAC
CTCAACACCA CGCTAACGCC GATGCAGGAG TATGTGGTCG TGGGGCTGCG CTACCAGCTG
AAGATGCCGC TGGACAGGCT ACTCAAGGTG ACTCAGGAGT TTATCAATCC CAATGTGTCC
CGCTCCGGCC TCGCCCGCTG CCTCAAGCGC TACGGGGTGT CGCGCATCCA CAACATCGAG
CGTCCCGAGG TGCCGGATCA TTACTTCAAC CAGCTGCCCA TCGCCCAAGG CAGCGATATT
GTCACCTATA CCTTAAATCC AGAGACTCTG GCCCATACCC TGGCGCTGCC ACAGGCCGAC
GGCGACACAG TGCTGCAGGT GGCCTCGCTC ACCCTACCGC CACAACTGGC GGACGCCAAG
CCAAGCTCGG TACTTTTGGG CATAGATCCC CACAGCGACT GGATCTACTT AGATATCTAT
CAAGACGGTA ACACCCAGGC CACCAAGCGA TACATCACCC ATCTGCTTCG CCAAGGGCCG
TTTCATCTGC GTAAGCTTTT GGTACGCAAC TATCACACTT TCTTACAGCG CTTCCCTGGT
GCCACCATGG CACAGCTAAC ACCCGGCGCT GACATACAGA CACCTGAGCA TCAGGTAGCA
AGCGGAGACT CATAA
 
Protein sequence
MLEKPNHKTQ RRDSQTAARK LSASEYRHKN ATTTPEMRQF IQESELPVSQ LAKVLNISEA 
TVRKWRRRDS IEDTPNTPHH LNTTLTPMQE YVVVGLRYQL KMPLDRLLKV TQEFINPNVS
RSGLARCLKR YGVSRIHNIE RPEVPDHYFN QLPIAQGSDI VTYTLNPETL AHTLALPQAD
GDTVLQVASL TLPPQLADAK PSSVLLGIDP HSDWIYLDIY QDGNTQATKR YITHLLRQGP
FHLRKLLVRN YHTFLQRFPG ATMAQLTPGA DIQTPEHQVA SGDS