Gene Shew_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2644 
Symbol 
ID4924122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3119613 
End bp3119930 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content52% 
IMG OID640164239 
Producthypothetical protein 
Protein accessionYP_001094769 
Protein GI127513572 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.701609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCTCT ATACCGAAAA ACAGCTCAGG CTTATCGAAG CCGAATTGAA ACGACTGCAA 
TTGTGGCAAG ACCAGCCGCC TTCTGCCGAG GCGATGGCGG ACCCGACGCC CTTTGCCTGC
GAGTCGATGA CATTTGAGCA GTGGCTGCAG TTTATCTTTC TGCCCAAGAT GGGCGAGATC
ATCGCCGTTA ATGGCGCGCT GCCCAGTCAG ATTGCCTTGA CTCCCATGGC CGAGCATGTG
TGGCAGGGCA GAGCCGAGAT GCGAGTATTA ATCACCATTA TTAATCAATT AGATGAGCAT
TTGAGTGGAT CTAACTAA
 
Protein sequence
MSLYTEKQLR LIEAELKRLQ LWQDQPPSAE AMADPTPFAC ESMTFEQWLQ FIFLPKMGEI 
IAVNGALPSQ IALTPMAEHV WQGRAEMRVL ITIINQLDEH LSGSN