Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2636 |
Symbol | |
ID | 4920680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3110676 |
End bp | 3111473 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640164231 |
Product | methionine aminopeptidase |
Protein accession | YP_001094761 |
Protein GI | 127513564 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000406904 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.209641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAG TGATAAAAAC AGCCGAAGAG ATCGAAAAAA TGCGCGCGGC AGGCAAGCTG GCCGCCGAGG TATTAGAGAT GATTGCTCCC CATGTTAAGG CCGGGGTAAC CACAAACGAA CTCAATGATA TCTGTGCGAA ATATACCGAA GAGCAAGGCG CGATTTCGGC CCCGCTGGAT TATCATGGCT TTCCTAAATC TATCTGTACT TCCATCAACG AAGTGATCTG CCACGGCATC CCAAGCGATC GTGCCCTCAA AGATGGCGAC ATCATCAATA TCGACATCAC AGTGATCAAA GATGGCTACC ATGGCGACAC CTCTAAGATG TTCCTCATCG GTGATGTCAG CGCCAAAGAC AAGCGCCTGT GCCGCGTGGC TCAGGAGAGC CTGTATGAGG CGATCAAGAA GGTGCGTCCA GGCATGAAAC TGGGCGAAAT CGGCACCATC ATCGAGAAAT ATATCAAGAG CAAGAAAACC GGCCTGGAAA AATACAGTAT CGTCACCGAC TACTGTGGCC ACGGCATCGG CGCCGGCTTC CACGAGGAGC CACAGGTAAT GCACTACAAG AACAATGATA AGACGGTACT GCGTCCTGGC ATGTGTTTCA CCATAGAGCC GATGATCAAC GCCGGTCGTC ACACCAGCGT ACTGGACAAA GACGACAACT GGACGGTGAC CACCTCTGAC GGAAAAAACT CGGCTCAGTG GGAACACACT TTGCTGATCA CGCCAACGGG TGTAGAGGTC CTTACCCTGC GCGAAGAAGA AAACTTCCCC CGCATCATCA ACCACTAA
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Protein sequence | MSIVIKTAEE IEKMRAAGKL AAEVLEMIAP HVKAGVTTNE LNDICAKYTE EQGAISAPLD YHGFPKSICT SINEVICHGI PSDRALKDGD IINIDITVIK DGYHGDTSKM FLIGDVSAKD KRLCRVAQES LYEAIKKVRP GMKLGEIGTI IEKYIKSKKT GLEKYSIVTD YCGHGIGAGF HEEPQVMHYK NNDKTVLRPG MCFTIEPMIN AGRHTSVLDK DDNWTVTTSD GKNSAQWEHT LLITPTGVEV LTLREEENFP RIINH
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