Gene Shew_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2636 
Symbol 
ID4920680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3110676 
End bp3111473 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content52% 
IMG OID640164231 
Productmethionine aminopeptidase 
Protein accessionYP_001094761 
Protein GI127513564 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000406904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.209641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAG TGATAAAAAC AGCCGAAGAG ATCGAAAAAA TGCGCGCGGC AGGCAAGCTG 
GCCGCCGAGG TATTAGAGAT GATTGCTCCC CATGTTAAGG CCGGGGTAAC CACAAACGAA
CTCAATGATA TCTGTGCGAA ATATACCGAA GAGCAAGGCG CGATTTCGGC CCCGCTGGAT
TATCATGGCT TTCCTAAATC TATCTGTACT TCCATCAACG AAGTGATCTG CCACGGCATC
CCAAGCGATC GTGCCCTCAA AGATGGCGAC ATCATCAATA TCGACATCAC AGTGATCAAA
GATGGCTACC ATGGCGACAC CTCTAAGATG TTCCTCATCG GTGATGTCAG CGCCAAAGAC
AAGCGCCTGT GCCGCGTGGC TCAGGAGAGC CTGTATGAGG CGATCAAGAA GGTGCGTCCA
GGCATGAAAC TGGGCGAAAT CGGCACCATC ATCGAGAAAT ATATCAAGAG CAAGAAAACC
GGCCTGGAAA AATACAGTAT CGTCACCGAC TACTGTGGCC ACGGCATCGG CGCCGGCTTC
CACGAGGAGC CACAGGTAAT GCACTACAAG AACAATGATA AGACGGTACT GCGTCCTGGC
ATGTGTTTCA CCATAGAGCC GATGATCAAC GCCGGTCGTC ACACCAGCGT ACTGGACAAA
GACGACAACT GGACGGTGAC CACCTCTGAC GGAAAAAACT CGGCTCAGTG GGAACACACT
TTGCTGATCA CGCCAACGGG TGTAGAGGTC CTTACCCTGC GCGAAGAAGA AAACTTCCCC
CGCATCATCA ACCACTAA
 
Protein sequence
MSIVIKTAEE IEKMRAAGKL AAEVLEMIAP HVKAGVTTNE LNDICAKYTE EQGAISAPLD 
YHGFPKSICT SINEVICHGI PSDRALKDGD IINIDITVIK DGYHGDTSKM FLIGDVSAKD
KRLCRVAQES LYEAIKKVRP GMKLGEIGTI IEKYIKSKKT GLEKYSIVTD YCGHGIGAGF
HEEPQVMHYK NNDKTVLRPG MCFTIEPMIN AGRHTSVLDK DDNWTVTTSD GKNSAQWEHT
LLITPTGVEV LTLREEENFP RIINH