| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2624 |
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| Symbol | fabZ |
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| ID | 4923886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3098254 |
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| End bp | 3098715 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164218 |
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| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
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| Protein accession | YP_001094749 |
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| Protein GI | 127513552 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000168919 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCAAATC AATTAAATAC GATGGATATC AAAGAGATCC TAAAGTTCCT ACCTCACAGG
TATCCGTTTT TATTGATCGA TAGAGTCCTC GACTTTACGC CAGGTGAAAC ACTGCATGCG
ATCAAGAATG TCACCATCAA CGAGCCATTC TTCCAGGGCC ATTTCCCTGT AGCTCCTGTG
ATGCCAGGTG TATTGATCCT AGAGGCTATG GCCCAGGCGA CCGGTCTGTT AGCGTTTAAA
ACCATGAGCG ATGAGCCATC TAACGATGCC TTATACTATT TTGCCGGTAT CGATAACGCT
CGCTTCAAGC GTGTGGTCGA GCCAGGCGAC CAACTTCATT TCGAAGTTAA GATGATTAAA
GAACGCCGCG GGATTGGCGT CTTCACAGGT GAAGCTAAGG TCGATGGCGA ACTAGTTTGT
TCGGCAGAGA TCATGTGTGC CCGCAGAGAG ATTGCCAAGT GA
|
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| Protein sequence | MSNQLNTMDI KEILKFLPHR YPFLLIDRVL DFTPGETLHA IKNVTINEPF FQGHFPVAPV
MPGVLILEAM AQATGLLAFK TMSDEPSNDA LYYFAGIDNA RFKRVVEPGD QLHFEVKMIK
ERRGIGVFTG EAKVDGELVC SAEIMCARRE IAK
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