| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2621 |
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| Symbol | rnhB |
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| ID | 4920720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3095620 |
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| End bp | 3096246 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164215 |
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| Product | ribonuclease HII |
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| Protein accession | YP_001094746 |
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| Protein GI | 127513549 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.322497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTATCT ATAAACAAAT TACCGCCGAA CAGGTCGAGG CACTCTGCAG CGGTTTCTAC
GCCGGCGTCG ATGAAGTGGG CCGTGGCCCC TTGGTGGGCG ATGTGGTGAC CGCCGCCGTG
GTGCTGGACC CGAACAATCC TATTGAAGGG CTAAATGACT CCAAGAAGCT GTCGGAGAAG
AAGCGCGACG CCCTCTATGA GGAGATCCTC GCCAAGGCGC TGGATGTCAG CGTCGGACGC
TGTTCACCGC TGGAGATCGA TGAGCTCAAC ATACTGCACG CGACCATGCT GGCGATGCAG
CGCGCCGTCG CAGGACTGCG CGCCCGACCT GACAGAGTAT TGATCGACGG CAATCGGGTA
CCGGACTTTA CCGATGAGAC CCTGGAGGGT CATGCGGTGA TCAAGGGCGA TGGCCTGATC
CCGGCCATCA GCGCCGCCTC TATCGTTGCC AAAGTGGTGC GCGACAGAGA GATGGAAGCC
CTGGATGAGC GCTATCCCGA ATATGGCTTC GCCAAGCATA AGGGCTACCC CACCAAGGCC
CATTTCGAGG CGCTCGAGGC CCATGGCGTA CTGGCCGAGC ACCGCAAGAG TTTCAGGCCG
GTCAAGGAGC GTCTGGAGGC CTGTTAA
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| Protein sequence | MAIYKQITAE QVEALCSGFY AGVDEVGRGP LVGDVVTAAV VLDPNNPIEG LNDSKKLSEK
KRDALYEEIL AKALDVSVGR CSPLEIDELN ILHATMLAMQ RAVAGLRARP DRVLIDGNRV
PDFTDETLEG HAVIKGDGLI PAISAASIVA KVVRDREMEA LDERYPEYGF AKHKGYPTKA
HFEALEAHGV LAEHRKSFRP VKERLEAC
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