Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2612 |
Symbol | |
ID | 4920711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3079299 |
End bp | 3080339 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164206 |
Product | hypothetical protein |
Protein accession | YP_001094737 |
Protein GI | 127513540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACAT CAACAATAAA AAAACTCACA CTCGCAACTT CACTCGGTCT GATGGCCAGT TCTGCCATGG CAGGTTATGA CTTTAACGTC GGCGACGACG GCAAGCTGTC TTTCGGCGGC TACCTCAAGG TCGATGCCCG CTATGTTAAC GGCGATGTCG CCTATCGCGA CTTCTGGATC GGTACCGGCA CGCCGCTCGA AGAGAGCGCG TCACAGTTCC GTATCTTCGC CAACGAGTCT CGTTTCAATA CCAAGTATGT TCACGGCGAC GTGATGGGTT TCATCGAGAT GGATTTCCTC GGCGGTGGCG GCAATCAGGT GGTGTCTAAC TCGGCCCATC CACGTCTGCG TCACGCCTTC ATCAAGTATA AAGACTTAAC CGTGGGTCAG ACCTGGACCA CCTTCATGAA CACCAGTGCC ATCCCGGAAA CCGCCGACTT CGCCGGTGCC ACGGTTGGTC TGGCCTTCGT GCGTCAGGGC CAGATCCGCT ACGACATGGG CGGCTTCCAG GTCTCTATCG AGAACCCTGA GAGTGACGGC GGCGATACCG CCAACGACGA TCTGCCAGAT GTAGTAGCCC GTTATAACTT CAAGGGCGAC TGGGGTAACG TCTCCATCTC GGCGCTGGGT CGCAGGCTCA ACACCCTGGG TGGCAACAGC GAGACCGCCT TCGGTGGCTC GATTGCCGGT CGCATCAACA CCTTCGGCAA AGATGACCTG CGCTTCCAGT TCCACCAAGG GGAAGTGGGC CGTTACGTGG GCCTGGGGGT GACTAAAGAT CTTATCGGCG AAGAGGTGGA AACCAGCACC TCTTACCTGG CCGCCTACCG CCACTACTGG ACAGACACCC TGCGCAGCAC CTTCCTCTAT GGCCGCATCG AGACCGACAA GTCAGATGCC GATCGCAGCC AGTGGAGCGT CAACCTGTTC CAGAACCTGA CACCGGCTCT GGCCGTGGGT ATCGAAGTGG GTAACTTCGC CCTGGATGAC CAGAAGGTCG ATTCTAACTA CGCACAGTTC TCAATGCGTT ACGCCTTGTA A
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Protein sequence | MLTSTIKKLT LATSLGLMAS SAMAGYDFNV GDDGKLSFGG YLKVDARYVN GDVAYRDFWI GTGTPLEESA SQFRIFANES RFNTKYVHGD VMGFIEMDFL GGGGNQVVSN SAHPRLRHAF IKYKDLTVGQ TWTTFMNTSA IPETADFAGA TVGLAFVRQG QIRYDMGGFQ VSIENPESDG GDTANDDLPD VVARYNFKGD WGNVSISALG RRLNTLGGNS ETAFGGSIAG RINTFGKDDL RFQFHQGEVG RYVGLGVTKD LIGEEVETST SYLAAYRHYW TDTLRSTFLY GRIETDKSDA DRSQWSVNLF QNLTPALAVG IEVGNFALDD QKVDSNYAQF SMRYAL
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