Gene Shew_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2612 
Symbol 
ID4920711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3079299 
End bp3080339 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content57% 
IMG OID640164206 
Producthypothetical protein 
Protein accessionYP_001094737 
Protein GI127513540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACAT CAACAATAAA AAAACTCACA CTCGCAACTT CACTCGGTCT GATGGCCAGT 
TCTGCCATGG CAGGTTATGA CTTTAACGTC GGCGACGACG GCAAGCTGTC TTTCGGCGGC
TACCTCAAGG TCGATGCCCG CTATGTTAAC GGCGATGTCG CCTATCGCGA CTTCTGGATC
GGTACCGGCA CGCCGCTCGA AGAGAGCGCG TCACAGTTCC GTATCTTCGC CAACGAGTCT
CGTTTCAATA CCAAGTATGT TCACGGCGAC GTGATGGGTT TCATCGAGAT GGATTTCCTC
GGCGGTGGCG GCAATCAGGT GGTGTCTAAC TCGGCCCATC CACGTCTGCG TCACGCCTTC
ATCAAGTATA AAGACTTAAC CGTGGGTCAG ACCTGGACCA CCTTCATGAA CACCAGTGCC
ATCCCGGAAA CCGCCGACTT CGCCGGTGCC ACGGTTGGTC TGGCCTTCGT GCGTCAGGGC
CAGATCCGCT ACGACATGGG CGGCTTCCAG GTCTCTATCG AGAACCCTGA GAGTGACGGC
GGCGATACCG CCAACGACGA TCTGCCAGAT GTAGTAGCCC GTTATAACTT CAAGGGCGAC
TGGGGTAACG TCTCCATCTC GGCGCTGGGT CGCAGGCTCA ACACCCTGGG TGGCAACAGC
GAGACCGCCT TCGGTGGCTC GATTGCCGGT CGCATCAACA CCTTCGGCAA AGATGACCTG
CGCTTCCAGT TCCACCAAGG GGAAGTGGGC CGTTACGTGG GCCTGGGGGT GACTAAAGAT
CTTATCGGCG AAGAGGTGGA AACCAGCACC TCTTACCTGG CCGCCTACCG CCACTACTGG
ACAGACACCC TGCGCAGCAC CTTCCTCTAT GGCCGCATCG AGACCGACAA GTCAGATGCC
GATCGCAGCC AGTGGAGCGT CAACCTGTTC CAGAACCTGA CACCGGCTCT GGCCGTGGGT
ATCGAAGTGG GTAACTTCGC CCTGGATGAC CAGAAGGTCG ATTCTAACTA CGCACAGTTC
TCAATGCGTT ACGCCTTGTA A
 
Protein sequence
MLTSTIKKLT LATSLGLMAS SAMAGYDFNV GDDGKLSFGG YLKVDARYVN GDVAYRDFWI 
GTGTPLEESA SQFRIFANES RFNTKYVHGD VMGFIEMDFL GGGGNQVVSN SAHPRLRHAF
IKYKDLTVGQ TWTTFMNTSA IPETADFAGA TVGLAFVRQG QIRYDMGGFQ VSIENPESDG
GDTANDDLPD VVARYNFKGD WGNVSISALG RRLNTLGGNS ETAFGGSIAG RINTFGKDDL
RFQFHQGEVG RYVGLGVTKD LIGEEVETST SYLAAYRHYW TDTLRSTFLY GRIETDKSDA
DRSQWSVNLF QNLTPALAVG IEVGNFALDD QKVDSNYAQF SMRYAL