| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2607 |
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| Symbol | |
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| ID | 4920739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3073024 |
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| End bp | 3074268 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164201 |
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| Product | putative branched-chain amino acid ABC transporter |
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| Protein accession | YP_001094732 |
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| Protein GI | 127513535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA AAATACTACT TAGCACCACG CTTGCTTGTT TCGCCTTCGC CTCGGGCGCT
GCCCAGGCCG AAGACACGGT TTTTGTTGGC CACCTGGCCG ACATGTCTGG CCCCACGGCC
TTCGTGGGTA AGCCATACGC CGACGGCGTG CGTGATGCCC TGGCCTATAT CAATGCCCAT
GGTGGCATCG ACGGCACTAA GCTGGAATAT GAGACCATAG ACTATGCCTA CAAGGTGCCT
CAGGCGATCG CCTCTTACAA GAAGTGGCTG TCGCGCAAGA ACATGGTGGC CATGCAGGGT
TGGGGCACGG CCGATACCGA GGCGCTGATC TCCTTTGCCG CCAAGGATAA GACGCCTATC
TTCTCAGCCT CTTACTCTGG TCATCTGACC GATCCTCAGG GCAAGAACCC GAACACCACT
AAGCCGGCGC CATATAACTT CTTCTACGGC GCATCTTACT CTGACGCCTG TCGCGGCCTG
GTGCAGTGGG CGGCTGAAGA TTGGAAGGCC AAGGGCGGAC AGGGCAAGCC TAAGTTTACC
CATATCGGCG CCAACCATCC TTTCCCTAAC GCGCCGAAAG AGGCCTGCGC CGAGTACGCC
ACCGAGCTGG GCTTCGACGT GCAGCCATCC GTGGTGATCT CCATGAAGCC GGGTGACTTT
AAGGCCCAGT GTTTGAGCCT CAAGAGCTCA GGCACCAACT ATGGTTATAT CGGCAACCTC
GGGGGCTCGG TGCAGTCGCT GATCAAGTCT TGCGACACTG TCGGCACCGA TATCCAGTTC
ATGTCCAACA TCTGGGGCGG CGACAAGCTG GTGTTCAAGG CCGCCGGTGA AGGGGTGAAG
AACTATATCT TCCCGACCAT GACGCCGTTC TGGACCGACG ATGTGCCGGG CATGAAGCTG
GTACGCGAGA TCTCTAAGAT GTCTGACAGC ACGGGCAAAG AGGAACGTCT GCACCACTAT
ATTCGCGGCG TCTGCTCGAC CTACTTCATG AAGGAGTCGA TGGAGTGGGC CAAGGCGCAC
GGCGGTATCA CAGGTGAGAA CGTCAAGAAG GGCATGTATG TGCACAAAGA CTGGGTGCCT
AAGGGGCTAG AGGGCGTCTG CCTGGCAGCT ACCTGGACGC CGGAAGATCA CCGCGGTATC
AACCAGGTCA ACATCTACAA GGGTAACTTT AACCATGGCG ATATCAAGGT CGAGAAGGTC
AGTCAGGTGA CCCTCGAGCG CCGCGTCGAC TGGTTAGGCT ACTAA
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| Protein sequence | MTKKILLSTT LACFAFASGA AQAEDTVFVG HLADMSGPTA FVGKPYADGV RDALAYINAH
GGIDGTKLEY ETIDYAYKVP QAIASYKKWL SRKNMVAMQG WGTADTEALI SFAAKDKTPI
FSASYSGHLT DPQGKNPNTT KPAPYNFFYG ASYSDACRGL VQWAAEDWKA KGGQGKPKFT
HIGANHPFPN APKEACAEYA TELGFDVQPS VVISMKPGDF KAQCLSLKSS GTNYGYIGNL
GGSVQSLIKS CDTVGTDIQF MSNIWGGDKL VFKAAGEGVK NYIFPTMTPF WTDDVPGMKL
VREISKMSDS TGKEERLHHY IRGVCSTYFM KESMEWAKAH GGITGENVKK GMYVHKDWVP
KGLEGVCLAA TWTPEDHRGI NQVNIYKGNF NHGDIKVEKV SQVTLERRVD WLGY
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