| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2605 |
|---|
| Symbol | |
|---|
| ID | 4920737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3070906 |
|---|
| End bp | 3072132 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640164199 |
|---|
| Product | putative phenylacetate-coenzyme A ligase |
|---|
| Protein accession | YP_001094730 |
|---|
| Protein GI | 127513533 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATT ATTTCAAACC CGAAGAGGCG CTTGCGCCCG AGCAGCGCGA GCAGCAGCTG
ATGGCGGCGC TGCCCGAGCA GCTCAGCTAT GCCAAGGCAA ACTGCCGCTA TTACGCCGAG
CTATTGACCG ATATCGAGGT GAGCAGCATC GATAGCCGTG AGGCGCTGGC GACCCTGCCC
ATCACCCACA AGGCAGACCT TATCGCCCTG CAGGCCAAAC TGCCGCCTTT TGCCGGCATG
ACGCCAAGAA AGCCCAGCGG GCGCATCTTT CAGTCACCCG GGCCCATCTA TGATCCCGAG
TGTGACGGCC ACGACTGGTG GCGCATGGGG CAGGCCTTCT TCGCCGCCGG ATTTCGAGCA
GGCGACCTGG TGCAAAACTG CTTGGCTTAT CATCTGACGC CCGGCGGCTT CATCATGGAC
TCGGGCGCCA GGGCCTGTGG CTGCACCGTT ATCCCGGCAG GGCCTGGGCA GAGCGAGATG
CAGCTGGACC TTATCGCCTC GCTTAAGCCA AATGGCTACT GCGGCACCCC CTCGTTTCTT
AATATCTTGC TGGAGAAGGG TAAAGCCCTG AGTAAGGATA CCAGTTCCAT CACCAAGGCA
CTGGTGTCGG GTGAGGTGTT AACCCCCTCC CTCAAGGCCA GCTTCGAGGC GGCGGATATC
GACGTCAAGC AGGCCTATGT CACCGCCGAT ATTGGCCTTA TCGCCTTCGA GAGCGTCTCG
GGTGAAGGCC TGGTGGTTGC CGAAGATATC ATCGTCGAGA TAGTGCGGCC CGGCACCTTA
ACTCCTGTGC CCGAAGGCGA GGTAGGCGAG GTGGTGGTCA CCAGCTTTAA CCGCGACTAT
CCGCTAGTGC GCTTCGCCAC CGGCGACTTG TCGGCCATCA TGCCGGGCAC GAGTGCCTGC
GGCCGCACCA ATGTGCGCAT CAAGGGCTGG ATGGGCCGCG CGGATCAGAC CACTAAGGTG
AAGGGCCTGT TTGTCCATCC CGAGCAGGTG GAGCGAATTC GCCGCCGTCA TCCGGGCATT
GTGAAGGTGC GCTTAGTCGT CACCCGTCAG CAGGACAACG ATCTGATGCG TCTGCTGTGC
GAGGTGGATG AGGCGACGGG GCCACAGCTG GATATCGCCG CCGTGCAGGA CTCGATCCGC
GCCGAGACCC AACTGTCGGG GGAGGTGGCG CTGGTGGCGC CAGGGGCGCT GGCGGATGAT
GGGGTGGTGA TTGAGGATCA GAGGTAG
|
|---|
| Protein sequence | MADYFKPEEA LAPEQREQQL MAALPEQLSY AKANCRYYAE LLTDIEVSSI DSREALATLP
ITHKADLIAL QAKLPPFAGM TPRKPSGRIF QSPGPIYDPE CDGHDWWRMG QAFFAAGFRA
GDLVQNCLAY HLTPGGFIMD SGARACGCTV IPAGPGQSEM QLDLIASLKP NGYCGTPSFL
NILLEKGKAL SKDTSSITKA LVSGEVLTPS LKASFEAADI DVKQAYVTAD IGLIAFESVS
GEGLVVAEDI IVEIVRPGTL TPVPEGEVGE VVVTSFNRDY PLVRFATGDL SAIMPGTSAC
GRTNVRIKGW MGRADQTTKV KGLFVHPEQV ERIRRRHPGI VKVRLVVTRQ QDNDLMRLLC
EVDEATGPQL DIAAVQDSIR AETQLSGEVA LVAPGALADD GVVIEDQR
|
|---|
| |