Gene Shew_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2597 
Symbol 
ID4920729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3064009 
End bp3064725 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID640164191 
Producthypothetical protein 
Protein accessionYP_001094722 
Protein GI127513525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGTCG ATTATTCGAA GTGTACCTTG GATGAGCTGC TTGATGTTAA CGACAACATA 
GATAAAGCGC AGTACCCAGA TAGGTATCAA CAACTCACAG ATGAGATAAA GCGCAGAAGG
GCCGCTGGCG AGGTTGCCAC TAGCAGGCAA AGGCCGCCAG ATTGGCTTTA TGATGATGAG
GACGATGTTT TTATTGAGTT CGCATCGGAT GGCCCCAAGG GCTCTAGATA CTTGTTTATC
TTTTTATTTT TCATGATTAA CCTCGTCTTT TTCGCCTATG TATTGCCTAA ATATCATGTG
GCCGATTTGG CAGACGTGCA TGAATACTCG ACCACTATCG ATGCTATCCA GTGCCGTAGT
AGCGAGGTTA TCGATGAGGA GACGGGGGGG ACTTTTTACG ACCTGGAAAT TACCTCTTTT
CAAGATAACT TCTATGCCGT CAATATCGGC GCGAGCAAGT GCCATCGCCT AGCGCAAAGC
CTTAAAGTGG GAGAGAAGAT CGCCATCTGG CATGAAGCTG GACTGATACT TCAGCTGAAA
GCCGCGAATA AGACTCTGCT TCCCTATAAA TATATGAAGC CTAAGGTACG TCAGTTTCAA
ACCAGTTATC TAATCTACTT CTGGTTTGGC TTGCTTATCT TTTGGAGCGG GCTGTTTAAA
TCTCTTATCA ATGCTTTGGC CCCTGGCACC TTTAAGGTGC GAGAAGATGT GCCCTAG
 
Protein sequence
MSVDYSKCTL DELLDVNDNI DKAQYPDRYQ QLTDEIKRRR AAGEVATSRQ RPPDWLYDDE 
DDVFIEFASD GPKGSRYLFI FLFFMINLVF FAYVLPKYHV ADLADVHEYS TTIDAIQCRS
SEVIDEETGG TFYDLEITSF QDNFYAVNIG ASKCHRLAQS LKVGEKIAIW HEAGLILQLK
AANKTLLPYK YMKPKVRQFQ TSYLIYFWFG LLIFWSGLFK SLINALAPGT FKVREDVP