Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2597 |
Symbol | |
ID | 4920729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3064009 |
End bp | 3064725 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640164191 |
Product | hypothetical protein |
Protein accession | YP_001094722 |
Protein GI | 127513525 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGTCG ATTATTCGAA GTGTACCTTG GATGAGCTGC TTGATGTTAA CGACAACATA GATAAAGCGC AGTACCCAGA TAGGTATCAA CAACTCACAG ATGAGATAAA GCGCAGAAGG GCCGCTGGCG AGGTTGCCAC TAGCAGGCAA AGGCCGCCAG ATTGGCTTTA TGATGATGAG GACGATGTTT TTATTGAGTT CGCATCGGAT GGCCCCAAGG GCTCTAGATA CTTGTTTATC TTTTTATTTT TCATGATTAA CCTCGTCTTT TTCGCCTATG TATTGCCTAA ATATCATGTG GCCGATTTGG CAGACGTGCA TGAATACTCG ACCACTATCG ATGCTATCCA GTGCCGTAGT AGCGAGGTTA TCGATGAGGA GACGGGGGGG ACTTTTTACG ACCTGGAAAT TACCTCTTTT CAAGATAACT TCTATGCCGT CAATATCGGC GCGAGCAAGT GCCATCGCCT AGCGCAAAGC CTTAAAGTGG GAGAGAAGAT CGCCATCTGG CATGAAGCTG GACTGATACT TCAGCTGAAA GCCGCGAATA AGACTCTGCT TCCCTATAAA TATATGAAGC CTAAGGTACG TCAGTTTCAA ACCAGTTATC TAATCTACTT CTGGTTTGGC TTGCTTATCT TTTGGAGCGG GCTGTTTAAA TCTCTTATCA ATGCTTTGGC CCCTGGCACC TTTAAGGTGC GAGAAGATGT GCCCTAG
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Protein sequence | MSVDYSKCTL DELLDVNDNI DKAQYPDRYQ QLTDEIKRRR AAGEVATSRQ RPPDWLYDDE DDVFIEFASD GPKGSRYLFI FLFFMINLVF FAYVLPKYHV ADLADVHEYS TTIDAIQCRS SEVIDEETGG TFYDLEITSF QDNFYAVNIG ASKCHRLAQS LKVGEKIAIW HEAGLILQLK AANKTLLPYK YMKPKVRQFQ TSYLIYFWFG LLIFWSGLFK SLINALAPGT FKVREDVP
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