| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2592 |
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| Symbol | |
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| ID | 4920898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3057319 |
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| End bp | 3058905 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164186 |
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| Product | peptidase M28 |
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| Protein accession | YP_001094717 |
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| Protein GI | 127513520 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATACCC CACGCCTCTT GGGCTTACTC GGCCTGTTGC TCCTACCGGC CGCCAGTGCC
GCCCCCTTCG TCTTTGACCA ACAAAGCTAC CGTCAGGATG TGCAAACCCT CGCCAGCGAT
GAGTTTGAGG GCCGCGGCCC CCTCTCACAG GGTGAAACTC TTACGGTGGA ATATCTTGAG
AATGCCTTCA AGAAGATGGG GTTAGCACCA GGCTTTGGTG ACAGCTATCG CCAGAGCGTG
CCCATGGCCA AGATCACCGC CGATCAGAAT ATGCAGCTAA AAGTAGGCGA GCTGGTGTTT
AACAACGGCA GCGACTTCAC CGCCCGCACC GAGCAGATCC AGCCAAGCAT CACGCTGGAT
AACAGCGAAA TCGTCTTCGT CGGCTATGGC ATCAACGCCC CCGAATACGG CTGGAACGAC
TACGCCGGTA TCGATGTGAA AGGCAAGACG GTGATCCTCA TGGTCAATGA CCCAGGCTTT
GCCACTCAAG ACCCAGAGGT GTTTAAGGGC AACGCCATGA CCTACTATGG CCGCTGGACC
TATAAGTATG AAGAGGCCGC CAGACAAGGG GCCAAGGCGG TATTTATCAT CCATGAAACC
GCTCCCGCCG CCTATGGCTG GAACGTGGTG CAAAACAGCA ACACCAATAC CAAATACACC
TTGGTGGACA AGGAGAAGAA CCGCTCCCAC ATAGGCGTCA TGGGCTGGGT CCAACACGAG
GTGGCGCAGA AGATCTTCAC CGCCGCGGGC CTGGATTACG ACAAACTCAA GCTCACCGCC
GCCAAGCCAG GCTTTAAGTC GCGATCGCTA GATCTCAAGG CCAATCTAGA GGTGAAAAAC
GATATCGAAC TGGCCACCTC CTATAACGTT GCAGGTCTCT TGCCGGGCAA GACGCGCCCG
GATGAGTGGC TGGTGATGCA CGCCCACTGG GATCATCTGG GTAAAACGGT CCATGAAGAT
CAGACCCGCA TCTACAACGG CGCGGTAGAC AACGCCTCGG GCGTGGCCGG TGTACTGCAG
CTGGCGCGGC ACTTTAAAGA CCTAAGCGCT ACTCAGCCAC CTGCACGCTC CATGCTATTC
AGCGCCTTCA CCGCCGAGGA AACCGGCCTC ATCGGTGCCC AGTATTTCGC CGAAAATTCA
CCAGTCCCCA CCAAGCAGCT GGTCGCCTTC CTCAACATAG ACGGCATGAA TGTCGGCAAG
GGAGTGGATT ACATACTGCG TTATGGTGAA GGGGTCTCAG AGCTGGAAAA CTACCTGGAC
AAGGCCGCCA AGGCCCAAGG GCGTTGGGTC AAGGCCGATC CGCGGCCGCA AAATGGCCTG
ATGTTCCGCT CGGATCATTT CGCCCTGGCC AAACAGGGGG TGCCCGGTCT GATGTTTATG
AGTCTGGGAG ATACCGACCC TGATTATATC GCCCACAAGT ATCATCAGGG TGCCGACGAT
TACGACCCAA GTTGGACCCT CGGTGGCGTC GAGCAAGATT TGGCGCTCAT CAGCGATATC
CTAGAGAAGC TGGCCAACAA TAACGACTGG CCAAAGTGGC TCGAGGCGTC AGATTTTAAG
ACCCGCCGCG CCCAGGACGG CCGCTAG
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| Protein sequence | MNTPRLLGLL GLLLLPAASA APFVFDQQSY RQDVQTLASD EFEGRGPLSQ GETLTVEYLE
NAFKKMGLAP GFGDSYRQSV PMAKITADQN MQLKVGELVF NNGSDFTART EQIQPSITLD
NSEIVFVGYG INAPEYGWND YAGIDVKGKT VILMVNDPGF ATQDPEVFKG NAMTYYGRWT
YKYEEAARQG AKAVFIIHET APAAYGWNVV QNSNTNTKYT LVDKEKNRSH IGVMGWVQHE
VAQKIFTAAG LDYDKLKLTA AKPGFKSRSL DLKANLEVKN DIELATSYNV AGLLPGKTRP
DEWLVMHAHW DHLGKTVHED QTRIYNGAVD NASGVAGVLQ LARHFKDLSA TQPPARSMLF
SAFTAEETGL IGAQYFAENS PVPTKQLVAF LNIDGMNVGK GVDYILRYGE GVSELENYLD
KAAKAQGRWV KADPRPQNGL MFRSDHFALA KQGVPGLMFM SLGDTDPDYI AHKYHQGADD
YDPSWTLGGV EQDLALISDI LEKLANNNDW PKWLEASDFK TRRAQDGR
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